RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SPATA18Q8TC71 538 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 SPPL2BQ8TCT7 592 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 SMARCD2Q92925 531 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 TMEM209Q96SK2 561 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 DDX23Q9BUQ8 820 aaKnown RBP25.28■■□□□ 1.64
SMPD1-209ENST00000533196 LRRC3Q9BY71 257 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 DNAJC25Q9H1X3 360 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 PCIF1Q9H4Z3 704 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 SIT1Q9Y3P8 196 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 PVALEFA0A1B0GWK0 134 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 GOLGA8IPA6NC78 632 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 ZNF233A6NK53 670 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 GOLGA8JA6NMD2 632 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 ITGB3P05106 788 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 FCARP24071 287 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 POLR2BP30876 1174 aaKnown RBP25.27■■□□□ 1.64
SMPD1-209ENST00000533196 WNT7BP56706 349 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 FOXD4L6Q3SYB3 417 aaPredicted RBP25.27■■□□□ 1.64
SMPD1-209ENST00000533196 SLC39A12Q504Y0 691 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 FAM78AQ5JUQ0 283 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 WSCD1Q658N2 575 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 FOXD4L3Q6VB84 417 aaPredicted RBP25.27■■□□□ 1.64
SMPD1-209ENST00000533196 DCP1BQ8IZD4 617 aaKnown RBP25.27■■□□□ 1.64
SMPD1-209ENST00000533196 DNASE1L2Q92874 299 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 PSMG2Q969U7 264 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 E2F7Q96AV8 911 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 OSBPL6Q9BZF3 934 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 TRPV4Q9HBA0 871 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 FAM86C1Q9NVL1 165 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 AGAP1Q9UPQ3 857 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 SLC27A5Q9Y2P5 690 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
SMPD1-209ENST00000533196 KANSL1LA0AUZ9 987 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 TMEM191BP0C7N4 346 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 NBL1P41271 181 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 EHHADHQ08426 723 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 SNW1Q13573 536 aaKnown RBP25.26■■□□□ 1.63
SMPD1-209ENST00000533196 PKP1Q13835 747 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 TMC8Q8IU68 726 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 TMEM86AQ8N2M4 240 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 DEPDC1BQ8WUY9 529 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 HPS3Q969F9 1004 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 PLA2G2FQ9BZM2 168 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 PDE11AQ9HCR9 933 aa25.26■■□□□ 1.63
SMPD1-209ENST00000533196 HUS1O60921 280 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 HOXD13P35453 343 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 RBP5P82980 135 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 DNM1Q05193 864 aaKnown RBP25.25■■□□□ 1.63
SMPD1-209ENST00000533196 DNAJB7Q7Z6W7 309 aaPredicted RBP25.25■■□□□ 1.63
SMPD1-209ENST00000533196 CSGALNACT2Q8N6G5 542 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 GLIS3Q8NEA6 775 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 PJA1Q8NG27 643 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 CXorf38Q8TB03 319 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 SHKBP1Q8TBC3 707 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 ANKRD36BP1Q96IX9 119 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 INTS13Q9NVM9 706 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 GDAP2Q9NXN4 497 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 HSPBP1Q9NZL4 362 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 DLGAP2Q9P1A6 1054 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 R3HCC1Q9Y3T6 440 aaKnown RBP25.25■■□□□ 1.63
SMPD1-209ENST00000533196 F5P12259 2224 aa25.25■■□□□ 1.63
SMPD1-209ENST00000533196 PSMC3P17980 439 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 TSPY1Q01534 308 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 VEPH1Q14D04 833 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 ANGPT1Q15389 498 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 TEAD2Q15562 447 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 SPRYD3Q8NCJ5 442 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 NOC3LQ8WTT2 800 aaKnown RBP25.24■■□□□ 1.63
SMPD1-209ENST00000533196 NELL2Q99435 816 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 TRMT61BQ9BVS5 477 aaKnown RBP25.24■■□□□ 1.63
SMPD1-209ENST00000533196 TRPV5Q9NQA5 729 aa25.24■■□□□ 1.63
SMPD1-209ENST00000533196 CGNQ9P2M7 1197 aaKnown RBP25.24■■□□□ 1.63
SMPD1-209ENST00000533196 MAGEA9P43362 315 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 NFE2Q16621 373 aaPredicted RBP25.23■■□□□ 1.63
SMPD1-209ENST00000533196 MGAT5BQ3V5L5 792 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 CEP57L1Q8IYX8 460 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 TOP6BLQ8N6T0 577 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 ZSCAN18Q8TBC5 510 aaPredicted RBP25.23■■□□□ 1.63
SMPD1-209ENST00000533196 IRF7Q92985 503 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 ZSWIM3Q96MP5 696 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 SEPT5Q99719 369 aaPredicted RBP25.23■■□□□ 1.63
SMPD1-209ENST00000533196 ACBD6Q9BR61 282 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 PCDHB5Q9Y5E4 795 aa25.23■■□□□ 1.63
SMPD1-209ENST00000533196 CACNA1IQ9P0X4 2223 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 NUP210Q8TEM1 1887 aaPredicted RBP25.22■■□□□ 1.63
SMPD1-209ENST00000533196 A0A1W2PRU2 124 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 TULP1O00294 542 aaPredicted RBP25.22■■□□□ 1.63
SMPD1-209ENST00000533196 TNNC2P02585 160 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 KRT19P08727 400 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 SLFN14P0C7P3 912 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 HAPLN1P10915 354 aaPredicted RBP25.22■■□□□ 1.63
SMPD1-209ENST00000533196 GJA1P17302 382 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 MYL7Q01449 175 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 MYO1EQ12965 1108 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 BMT2Q1RMZ1 405 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 DPH6Q7L8W6 267 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 HS2ST1Q7LGA3 356 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 LRRTM3Q86VH5 581 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 CBWD2Q8IUF1 395 aa25.22■■□□□ 1.63
SMPD1-209ENST00000533196 WDR49Q8IV35 697 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms