RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TUSC3Q13454 348 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 CRY1Q16526 586 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 UTP14CQ5TAP6 766 aaKnown RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 EMC10Q5UCC4 262 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 IGF2-ASQ6U949 168 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 KDM7AQ6ZMT4 941 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 SYT13Q7L8C5 426 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 ARID3BQ8IVW6 561 aaPredicted RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 NETO1Q8TDF5 533 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 ATOH1Q92858 354 aaPredicted RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 GABRG3Q99928 467 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 LNPKQ9C0E8 428 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 TMEM245Q9H330 911 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 CA14Q9ULX7 337 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 PCDHGA5Q9Y5G8 931 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 PHF3Q92576 2039 aaKnown RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 MTMR11A4FU01 709 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 OTUD1Q5VV17 481 aaPredicted RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 KIAA1614Q5VZ46 1190 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 CHD1LQ86WJ1 897 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 RNF169Q8NCN4 708 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 GAB3Q8WWW8 586 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 RSPH1Q8WYR4 309 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 PSMG2Q969U7 264 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 MS4A3Q96HJ5 214 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 FAM49AQ9H0Q0 323 aaPredicted RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 CRTAC1Q9NQ79 661 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 TPCN1Q9ULQ1 816 aa1.95□□□□□ -2.1
KNL1-211ENST00000533001 FNDC3AQ9Y2H6 1198 aaKnown RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 MRPL11Q9Y3B7 192 aaKnown RBP1.95□□□□□ -2.1
KNL1-211ENST00000533001 CHADO15335 359 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SOAT2O75908 522 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 POMCP01189 267 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 GJA4P35212 333 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 EIF2S3P41091 472 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 LILRA4P59901 499 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 CFHR1Q03591 330 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 GPR17Q13304 367 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 AXDND1Q5T1B0 1012 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 FCHSD1Q86WN1 690 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 CATSPER3Q86XQ3 398 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SMAP1Q8IYB5 467 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 ZNF516Q92618 1163 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 PIWIL1Q96J94 861 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 KIFC3Q9BVG8 833 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 NCOA5Q9HCD5 579 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 CSNK1G1Q9HCP0 422 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ZDHHC4Q9NPG8 344 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 HSFX1Q9UBD0 423 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 GABBR1Q9UBS5 961 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 K7EM74 188 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 BEST1O76090 585 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 C8AP07357 584 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 GM2AP17900 193 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 TNFSF9P41273 254 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 PKDCCQ504Y2 493 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 FAM47CQ5HY64 1035 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 CREB3L3Q68CJ9 461 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 HIST2H2BCQ6DN03 193 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 LAIR1Q6GTX8 287 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ITPRIPQ8IWB1 547 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 PLCD3Q8N3E9 789 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SNIP1Q8TAD8 396 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 WFDC5Q8TCV5 224 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 PHKBQ93100 1093 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SUSD3Q96L08 255 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 CYP2S1Q96SQ9 504 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ESYT1Q9BSJ8 1104 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SDCBP2Q9H190 292 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ST6GALNAC4Q9H4F1 302 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 TUBGCP4Q9UGJ1 667 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 KLF15Q9UIH9 416 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 STOML2Q9UJZ1 356 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 RCAN3Q9UKA8 241 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 INSL5Q9Y5Q6 135 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SNX14Q9Y5W7 946 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SPECC1L-ADORA2AF8WAN1 911 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 PRPF3O43395 683 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 PPFIA3O75145 1194 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 DDAH1O94760 285 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 FUCA1P04066 466 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 KRT10P13645 584 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 DRD3P35462 400 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 MPLP40238 635 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 METAP2P50579 478 aaKnown RBP eCLIP1.94□□□□□ -2.1
KNL1-211ENST00000533001 ENOX2Q16206 610 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 TRIM68Q6AZZ1 485 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 LLGL2Q6P1M3 1020 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 EPM2AIP1Q7L775 607 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 TMPRSS9Q7Z410 1059 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 C17orf82Q86X59 251 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 CBARPQ8N350 705 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 UBR7Q8N806 425 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 WHAMMQ8TF30 809 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 MRGPRX3Q96LB0 322 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ZNF558Q96NG5 402 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 STARD5Q9NSY2 213 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ZFP37Q9Y6Q3 630 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 IGHV1OR15-9A0A0B4J2B8 117 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SPAARA0A1B0GVQ0 90 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms