RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GPAT2Q6NUI2 795 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 MTMR12Q9C0I1 747 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 FAM96AQ9H5X1 160 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 FAM50BQ9Y247 325 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 PCDHB2Q9Y5E7 798 aa11.86□□□□□ -0.51
PTPRK-221ENST00000532331 CKBP12277 381 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 GARTP22102 1010 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 FGFR4P22455 802 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 GTF2H1P32780 548 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 FBXO38Q6PIJ6 1188 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 FIBCD1Q8N539 461 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 PI4K2AQ9BTU6 479 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 VPS11Q9H270 941 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 AGPAT3Q9NRZ7 376 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 CFLARO15519 480 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 MCF2P10911 925 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 PRMT2P55345 433 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 SYTL3Q4VX76 610 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 TREML2Q5T2D2 321 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 TRAPPC12Q8WVT3 735 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 MKL1Q969V6 931 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 ACTR5Q9H9F9 607 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 FGFR1OP2Q9NVK5 253 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 AKT1P31749 480 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 COPS2P61201 443 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 TWF1Q12792 350 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 EPM2AIP1Q7L775 607 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 SLC30A5Q8TAD4 765 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 SNF8Q96H20 258 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 GAS2L1Q99501 681 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 DDX47Q9H0S4 455 aaKnown RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 SYNCRIPO60506 623 aaKnown RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 DCTN3O75935 186 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 OVOS1Q6IE37 1185 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 CCDC137Q6PK04 289 aaKnown RBP11.85□□□□□ -0.51
PTPRK-221ENST00000532331 KDELC2Q7Z4H8 507 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 ZNF558Q96NG5 402 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 EGFL8Q99944 293 aa11.85□□□□□ -0.51
PTPRK-221ENST00000532331 F5H5T6 163 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 MMEP08473 750 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 MIB1Q86YT6 1006 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 GIPC2Q8TF65 315 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 MCEEQ96PE7 176 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 DRC3Q9H069 523 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 SLC13A4Q9UKG4 626 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 GRB10Q13322 594 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PPM1NQ8N819 430 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 CSGALNACT1Q8TDX6 532 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 RAPGEF5Q92565 580 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PACSIN2Q9UNF0 486 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PCDHB5Q9Y5E4 795 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PSMD3O43242 534 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 UBA1P22314 1058 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 MAP2K2P36507 400 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PIGHQ14442 188 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 ZC3H18Q86VM9 953 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 TBC1D19Q8N5T2 526 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 ULK4Q96C45 1275 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 USP2O75604 605 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PNMA6AP0CW24 399 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 ACADMP11310 421 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 AKAP5P24588 427 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PDIA2Q13087 525 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 CCDC124Q96CT7 223 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 UPF3AQ9H1J1 476 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 TLL1O43897 1013 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 CTDNEP1O95476 244 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 BRD2P25440 801 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 CCDC157Q569K6 752 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 HP1BP3Q5SSJ5 553 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 ACOT1Q86TX2 421 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 USP33Q8TEY7 942 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 TRIM15Q9C019 465 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 APOBEC2Q9Y235 224 aaKnown RBP11.84□□□□□ -0.51
PTPRK-221ENST00000532331 MYO5BQ9ULV0 1848 aa11.84□□□□□ -0.51
PTPRK-221ENST00000532331 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 SMIM24O75264 130 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 GPD1P21695 349 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 CUL2Q13617 745 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 HSP90AA5PQ58FG0 334 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 FSCBQ5H9T9 825 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ACAD11Q709F0 780 aa11.83□□□□□ -0.52
PTPRK-221ENST00000532331 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms