RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 MAFFQ9ULX9 164 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 CDY1Q9Y6F8 540 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 LRRC10BA6NIK2 292 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 LINC01565O15544 149 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 TGM5O43548 720 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 LRRN2O75325 713 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 CAVIN2O95810 425 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 AFPP02771 609 aaKnown RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 WARSP23381 471 aaKnown RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 KLRC2P26717 231 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 OR1D2P34982 312 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 PIK3CAP42336 1068 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 ASPAP45381 313 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 LHX1P48742 406 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 NOP14P78316 857 aaKnown RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 ROR1Q01973 937 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 SKIV2LQ15477 1246 aaKnown RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 TPD52L1Q16890 204 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 TCP11X2Q5H9J9 407 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 ZNF667Q5HYK9 610 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 MIIPQ5JXC2 388 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 TPGS2Q68CL5 300 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 RTL10Q7L3V2 364 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 DHX40Q8IX18 779 aaKnown RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 OR10T2Q8NGX3 314 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 ZNF461Q8TAF7 563 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 MSLNLQ96KJ4 702 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 PKMYT1Q99640 499 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 ACBD6Q9BR61 282 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 FBXW11Q9UKB1 542 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 COG5Q9UP83 839 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 TCF20Q9UGU0 1960 aaKnown RBP15.51■□□□□ 0.07
CPSF1-206ENST00000531480 PTPRDP23468 1912 aa15.51■□□□□ 0.07
CPSF1-206ENST00000531480 A0A0C4DFX4 3053 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 WDR27A2RRH5 827 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 GTPBP10A4D1E9 387 aaKnown RBP15.5■□□□□ 0.07
CPSF1-206ENST00000531480 KCNJ18B7U540 433 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 TULP1O00294 542 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-206ENST00000531480 TBX10O75333 385 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 GLUD1P00367 558 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 EPCAMP16422 314 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 TNNC1P63316 161 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 RBM10P98175 930 aaKnown RBP15.5■□□□□ 0.07
CPSF1-206ENST00000531480 MYL7Q01449 175 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 GPR17Q13304 367 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 KCNJ12Q14500 433 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 IQCB1Q15051 598 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 MAN2A1Q16706 1144 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 OSTM1Q86WC4 334 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 METTL23Q86XA0 190 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 ADGRF2Q8IZF7 708 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 CASP10Q92851 521 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 RHOBTB2Q9BYZ6 727 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 IMPG2Q9BZV3 1241 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 ZCWPW1Q9H0M4 648 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 PLEKHA4Q9H4M7 779 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 FANCLQ9NW38 375 aa15.5■□□□□ 0.07
CPSF1-206ENST00000531480 VNN2O95498 520 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 ATF2P15336 505 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 HOXB8P17481 243 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-206ENST00000531480 ZNF165P49910 485 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 DLX2Q07687 328 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-206ENST00000531480 INCA1Q0VD86 236 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 TJAP1Q5JTD0 557 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 SPOPLQ6IQ16 392 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 TUBGCP2Q9BSJ2 902 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 PI4K2AQ9BTU6 479 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 NIF3L1Q9GZT8 377 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 SDCBP2Q9H190 292 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 IGFLR1Q9H665 355 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 UBE2ZQ9H832 354 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-206ENST00000531480 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 CYP3A43Q9HB55 503 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 DZANK1Q9NVP4 752 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 HSFX1Q9UBD0 423 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 DPP7Q9UHL4 492 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 POLIQ9UNA4 740 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 NME7Q9Y5B8 376 aa15.49■□□□□ 0.07
CPSF1-206ENST00000531480 POU2F2P09086 479 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 SRGAP2BP0DMP2 458 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 P4HA1P13674 534 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 HOXA9P31269 272 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 CA8P35219 290 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 MTIF2P46199 727 aaKnown RBP15.48■□□□□ 0.07
CPSF1-206ENST00000531480 CETN1Q12798 172 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 SMARCB1Q12824 385 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 UVSSAQ2YD98 709 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 SMYD5Q6GMV2 418 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 ANKRD54Q6NXT1 300 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 FAM171BQ6P995 826 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 SYCE2Q6PIF2 218 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 APTXQ7Z2E3 356 aaKnown RBP15.48■□□□□ 0.07
CPSF1-206ENST00000531480 LRRTM3Q86VH5 581 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 PALB2Q86YC2 1186 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 TCEAL8Q8IYN2 117 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 THEM5Q8N1Q8 247 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
CPSF1-206ENST00000531480 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-206ENST00000531480 HLA-CQ95604 372 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms