RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 M0QZQ0 153 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 TM4SF5O14894 197 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 GIPC1O14908 333 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 DCLK1O15075 740 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 MEFVO15553 781 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 RNF40O75150 1001 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 TOM1L1O75674 476 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 EPN2O95208 641 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PAPSS2O95340 614 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PRAMEF12O95522 483 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 EGFP01133 1207 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PROS1P07225 676 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 CLTAP09496 248 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 SPINK2P20155 84 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PROZP22891 400 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 AVPR1AP37288 418 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 MPLP40238 635 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 TNFSF9P41273 254 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 TUFMP49411 452 aaKnown RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 NOVA1P51513 510 aaKnown RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 GALK1P51570 392 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 LIMK1P53667 647 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PPP2R3AQ06190 1150 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 BFSP1Q12934 665 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 RUNX3Q13761 415 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 CCINQ13939 588 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 COL9A2Q14055 689 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PDIA5Q14554 519 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 UAP1L1Q3KQV9 507 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 SLC39A12Q504Y0 691 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 METTL23Q86XA0 190 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 DAW1Q8N136 415 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 THEM5Q8N1Q8 247 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 MAB21L3Q8N8X9 362 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 FAM184AQ8NB25 1140 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 PSMG2Q969U7 264 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 SENP8Q96LD8 212 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 MKNK1Q9BUB5 465 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 LSM14BQ9BX40 385 aaKnown RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 OXCT2Q9BYC2 517 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 RPF1Q9H9Y2 349 aaKnown RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 VPS45Q9NRW7 570 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 ARHGAP28Q9P2N2 729 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 UBQLN1Q9UMX0 589 aaKnown RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 MAGED2Q9UNF1 606 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-206ENST00000531430 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 CITO14578 2027 aa10.02□□□□□ -0.8
NEDD8-206ENST00000531430 NPHP3-ACAD11A0A0J9YXS1 232 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 PPEF2O14830 753 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 RHOBTB1O94844 696 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 CAVIN2O95810 425 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 ODC1P11926 461 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 CDC25CP30307 473 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 HOXA6P31267 233 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 RAP1GAPP47736 663 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 MCM2P49736 904 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 LIG4P49917 911 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.81
NEDD8-206ENST00000531430 DGKEP52429 567 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 AMPD2Q01433 879 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 MYBPC2Q14324 1141 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 DHX8Q14562 1220 aaKnown RBP10.02□□□□□ -0.81
NEDD8-206ENST00000531430 ELF2Q15723 593 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 DAB2IPQ5VWQ8 1189 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 FSTL4Q6MZW2 842 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 DTHD1Q6ZMT9 781 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 C1orf186Q6ZWK4 172 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 CCDC83Q8IWF9 413 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 BEST2Q8NFU1 509 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 EDEM2Q9BV94 578 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 FBRSL1Q9HCM7 1045 aaKnown RBP10.02□□□□□ -0.81
NEDD8-206ENST00000531430 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 ZMIZ1Q9ULJ6 1067 aa10.02□□□□□ -0.81
NEDD8-206ENST00000531430 ABLIM1O14639 778 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 PLS3P13797 630 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 ARSAP15289 507 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 NMT1P30419 496 aaKnown RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 LRPAP1P30533 357 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 LILRA4P59901 499 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 MCL1Q07820 350 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 ORC2Q13416 577 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 PLK5Q496M5 336 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 TMEM196Q5HYL7 178 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 TXNDC8Q6A555 127 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 UNQ6494/PRO21346Q6UXR6 183 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 KCNK18Q7Z418 384 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 CMTM8Q8IZV2 173 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 CAMKK1Q8N5S9 505 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 C4orf32Q8N8J7 132 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 RPLP0P6Q8NHW5 317 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 CHFRQ96EP1 664 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 CDK5RAP3Q96JB5 506 aa10.01□□□□□ -0.81
NEDD8-206ENST00000531430 PYM1Q9BRP8 204 aaKnown RBP10.01□□□□□ -0.81
NEDD8-206ENST00000531430 NTPCRQ9BSD7 190 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms