RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZNF830Q96NB3 372 aaPredicted RBP20.33■□□□□ 0.85
SMPD1-205ENST00000531303 PANX2Q96RD6 677 aa20.33■□□□□ 0.85
SMPD1-205ENST00000531303 TWNKQ96RR1 684 aa20.33■□□□□ 0.85
SMPD1-205ENST00000531303 ELOVL4Q9GZR5 314 aa20.33■□□□□ 0.85
SMPD1-205ENST00000531303 SPG21Q9NZD8 308 aa20.33■□□□□ 0.85
SMPD1-205ENST00000531303 NME7Q9Y5B8 376 aa20.33■□□□□ 0.85
SMPD1-205ENST00000531303 PCDHB12Q9Y5F1 795 aa20.33■□□□□ 0.85
SMPD1-205ENST00000531303 SF3B1O75533 1304 aaKnown RBP eCLIP20.33■□□□□ 0.84
SMPD1-205ENST00000531303 VWA8A3KMH1 1905 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 A8MXQ7 604 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 TACC1O75410 805 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 WARSP23381 471 aaKnown RBP20.32■□□□□ 0.84
SMPD1-205ENST00000531303 ACAT1P24752 427 aaKnown RBP20.32■□□□□ 0.84
SMPD1-205ENST00000531303 LMO2P25791 158 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 DEKP35659 375 aaKnown RBP20.32■□□□□ 0.84
SMPD1-205ENST00000531303 KLHL30Q0D2K2 578 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 INCA1Q0VD86 236 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 WDR59Q6PJI9 974 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 DPH6Q7L8W6 267 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 TAS1R1Q7RTX1 841 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 LIMS2Q7Z4I7 341 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 IRF2BP2Q7Z5L9 587 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 SLC47A2Q86VL8 602 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 SLC39A11Q8N1S5 342 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 WHAMMQ8TF30 809 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 SYN2Q92777 582 aaPredicted RBP20.32■□□□□ 0.84
SMPD1-205ENST00000531303 TMEM169Q96HH4 297 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 NLRC5Q86WI3 1866 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 TSC2P49815 1807 aa20.32■□□□□ 0.84
SMPD1-205ENST00000531303 ARHGEF37A1IGU5 675 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 PBX2P40425 430 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 CDR1P51861 262 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 RAD23BP54727 409 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 TDRD12Q587J7 1177 aaKnown RBP20.31■□□□□ 0.84
SMPD1-205ENST00000531303 ACOT1Q86TX2 421 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 LRRC8AQ8IWT6 810 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 TMEM86AQ8N2M4 240 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 CHP1Q99653 195 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 NT5C1AQ9BXI3 368 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 DDX43Q9NXZ2 648 aaKnown RBP20.31■□□□□ 0.84
SMPD1-205ENST00000531303 DSEQ9UL01 958 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 MTUS1Q9ULD2 1270 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 CNTN6Q9UQ52 1028 aa20.31■□□□□ 0.84
SMPD1-205ENST00000531303 TNRC18O15417 2968 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-205ENST00000531303 LINC01553A4QN01 128 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 ARHGEF15O94989 841 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CA3P07451 260 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 PLEKP08567 350 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 LINC00271P0C7V0 271 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CCDC172P0C7W6 258 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CD19P15391 556 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 SSTR3P32745 418 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CTNNB1P35222 781 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 PTK2Q05397 1052 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 ELAVL2Q12926 359 aaKnown RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 TAF3Q5VWG9 929 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 OVOS1Q6IE37 1185 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CHRDL2Q6WN34 429 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 TTC39CQ8N584 583 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 SLC4A11Q8NBS3 891 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 HEXIM2Q96MH2 286 aaKnown RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 BAG1Q99933 345 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 LPIN3Q9BQK8 851 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 VN1R3Q9BXE9 311 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 DPEP3Q9H4B8 488 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 HAUS4Q9H6D7 363 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 STXBP5LQ9Y2K9 1186 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 CYP11A1P05108 521 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 SERPING1P05155 500 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 TYMPP19971 482 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 GNA15P30679 374 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 HNRNPH3P31942 346 aaKnown RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 BMP8BP34820 402 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 LHX1P48742 406 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 ZNF132P52740 706 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 MLLT1Q03111 559 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 YWHAHQ04917 246 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 SPRED2Q7Z698 418 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 SLC20A1Q8WUM9 679 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 TMEM176AQ96HP8 235 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 C17orf80Q9BSJ5 609 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 YBX2Q9Y2T7 364 aaKnown RBP20.3■□□□□ 0.84
SMPD1-205ENST00000531303 PCDHA11Q9Y5I1 949 aa20.3■□□□□ 0.84
SMPD1-205ENST00000531303 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 FAM170AA1A519 330 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 GABRDO14764 452 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 SYN3O14994 580 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 THAP12O43422 761 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 ATP2C2O75185 946 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 FGF18O76093 207 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 CYP11B1P15538 503 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 FGFR3P22607 806 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 BRD2P25440 801 aaKnown RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 PPM1AP35813 382 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 EIF4A3P38919 411 aaKnown RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 BPIFB4P59827 614 aa20.29■□□□□ 0.84
SMPD1-205ENST00000531303 PSMC1P62191 440 aaKnown RBP20.29■□□□□ 0.84
SMPD1-205ENST00000531303 MEA1Q16626 185 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms