RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 ZNF783Q6ZMS7 281 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 MRGPREQ86SM8 312 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 COLGALT2Q8IYK4 626 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 PROKR1Q8TCW9 393 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 SUCLG2Q96I99 432 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 TRIB1Q96RU8 372 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 DPH1Q9BZG8 443 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 DDX21Q9NR30 783 aaKnown RBP eCLIP4.77□□□□□ -1.65
CD44-233ENST00000531141 HESX1Q9UBX0 185 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 SRRDQ9UH36 339 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 MAP3K2Q9Y2U5 619 aa4.77□□□□□ -1.65
CD44-233ENST00000531141 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 CFAP69A5D8W1 941 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 ISM1B1AKI9 464 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 MYO1FO00160 1098 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 TOR1BO14657 336 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 NARSO43776 548 aaKnown RBP4.76□□□□□ -1.65
CD44-233ENST00000531141 LPXNO60711 386 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 CAND2O75155 1236 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 SUN1O94901 812 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 UNC5CO95185 931 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 SPDEFO95238 335 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 THP07101 528 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 GRPP07492 148 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 KITP10721 976 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 SLC7A1P30825 629 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 RPS7P62081 194 aaKnown RBP4.76□□□□□ -1.65
CD44-233ENST00000531141 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 PREPLQ4J6C6 727 aaPredicted RBP4.76□□□□□ -1.65
CD44-233ENST00000531141 RNF220Q5VTB9 566 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 FAM160B1Q5W0V3 765 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.76□□□□□ -1.65
CD44-233ENST00000531141 USP51Q70EK9 711 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 USP37Q86T82 979 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 Q8NA96 180 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 PCSK9Q8NBP7 692 aaKnown RBP4.76□□□□□ -1.65
CD44-233ENST00000531141 PSD4Q8NDX1 1056 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 OR6B3Q8NGW1 331 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 ANKS1AQ92625 1134 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 P2RX7Q99572 595 aaKnown RBP4.76□□□□□ -1.65
CD44-233ENST00000531141 LRRC27Q9C0I9 530 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 BTBD1Q9H0C5 482 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 MMRN2Q9H8L6 949 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 AGAP1Q9UPQ3 857 aa4.76□□□□□ -1.65
CD44-233ENST00000531141 UNC119BA6NIH7 251 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 FZD7O75084 574 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 ZFPL1O95159 310 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 KIF20AO95235 890 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 TRIM27P14373 513 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 VIPR2P41587 438 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 SEMA5AQ13591 1074 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 TP53BP2Q13625 1128 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 HLXQ14774 488 aaPredicted RBP4.75□□□□□ -1.65
CD44-233ENST00000531141 SLC44A4Q53GD3 710 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 SP5Q6BEB4 398 aaPredicted RBP4.75□□□□□ -1.65
CD44-233ENST00000531141 TMPRSS9Q7Z410 1059 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 GGNQ86UU5 652 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 COL23A1Q86Y22 540 aaPredicted RBP4.75□□□□□ -1.65
CD44-233ENST00000531141 ADGRG5Q8IZF4 528 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 FAM46DQ8NEK8 389 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 POC1BQ8TC44 478 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 SNX19Q92543 992 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 TMEM125Q96AQ2 219 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 MOGAT1Q96PD6 335 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 MLST8Q9BVC4 326 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 SPATA5L1Q9BVQ7 753 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 SARGQ9BW04 601 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 BHMT2Q9H2M3 363 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.75□□□□□ -1.65
CD44-233ENST00000531141 TPCN1Q9ULQ1 816 aa4.75□□□□□ -1.65
CD44-233ENST00000531141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD44-233ENST00000531141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD44-233ENST00000531141 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 TBX3O15119 743 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 KRT18P05783 430 aaKnown RBP4.74□□□□□ -1.65
CD44-233ENST00000531141 ATXN1LP0C7T5 689 aaKnown RBP4.74□□□□□ -1.65
CD44-233ENST00000531141 BRAFP15056 766 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
CD44-233ENST00000531141 ITGALP20701 1170 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 FDXRP22570 491 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 LOXL3P58215 753 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 ZXDAP98168 799 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 MC2RQ01718 297 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 DYRK1AQ13627 763 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 RAB32Q13637 225 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 PTPAQ15257 358 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 ABHD17BQ5VST6 288 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 LMBRD2Q68DH5 695 aaPredicted RBP4.74□□□□□ -1.65
CD44-233ENST00000531141 MICALCLQ6ZW33 695 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 CCAR1Q8IX12 1150 aaKnown RBP4.74□□□□□ -1.65
CD44-233ENST00000531141 KRT78Q8N1N4 520 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 Q8N1X5 172 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 ASB10Q8WXI3 467 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 APIPQ96GX9 242 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 HEPHQ9BQS7 1158 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 SERHL2Q9H4I8 314 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 UNKLQ9H9P5 680 aaKnown RBP4.74□□□□□ -1.65
CD44-233ENST00000531141 TBCCD1Q9NVR7 557 aa4.74□□□□□ -1.65
CD44-233ENST00000531141 VSX1Q9NZR4 365 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms