RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SLC1A5Q15758 541 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 MAPK6Q16659 721 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF829Q3KNS6 432 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RABL6Q3YEC7 729 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 C6orf163Q5TEZ5 329 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 EGFLAMQ63HQ2 1017 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 CCDC62Q6P9F0 684 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 LRRC55Q6ZSA7 311 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 ATG9AQ7Z3C6 839 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 TMPRSS6Q8IU80 811 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RHOT2Q8IXI1 618 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 POU5F2Q8N7G0 328 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 VGLL2Q8N8G2 317 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 MORC4Q8TE76 937 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 MYD88Q99836 296 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 SPZ1Q9BXG8 430 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 RTFDC1Q9BY42 306 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 B3GNT4Q9C0J1 378 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 PAIP1Q9H074 479 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 ZSWIM5Q9P217 1185 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 ANKFY1Q9P2R3 1169 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 APPL1Q9UKG1 709 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 DIS3Q9Y2L1 958 aaKnown RBP8.19□□□□□ -1.1
PTPRK-219ENST00000531050 TACC3Q9Y6A5 838 aa8.19□□□□□ -1.1
PTPRK-219ENST00000531050 EMSYQ7Z589 1322 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 A0A0G2JND7 137 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 A0A1B0GTW7 788 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CAPN8A6NHC0 703 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 H3BRJ5 948 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 PEX1O43933 1283 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CDH16O75309 829 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 FARP2O94887 1054 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 PARNO95453 639 aaKnown RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 LDHBP07195 334 aaKnown RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ENO2P09104 434 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 INHBBP09529 407 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 HMOX2P30519 316 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 SLC16A2P36021 539 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 NPEPPSP55786 919 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 C21orf59P57076 290 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CDK16Q00536 496 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 LRRC63Q05C16 580 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CYP2A13Q16696 494 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 COBLL1Q53SF7 1204 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TMTC4Q5T4D3 741 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 FAM91A1Q658Y4 838 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ITPRIPL1Q6GPH6 555 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 RWDD4Q6NW29 188 aaKnown RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 AADACL2Q6P093 401 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ALKBH5Q6P6C2 394 aaKnown RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 KYAT3Q6YP21 454 aaKnown RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CYFIP1Q7L576 1253 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 COPS6Q7L5N1 327 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 LPCAT2Q7L5N7 544 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 IRF2BP2Q7Z5L9 587 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 SLC38A6Q8IZM9 456 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TTC5Q8N0Z6 440 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 SCFD1Q8WVM8 642 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ALG3Q92685 438 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 THTPAQ9BU02 230 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 SACM1LQ9NTJ5 587 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.11e-9■■□□□ 13.8
PTPRK-219ENST00000531050 GPRC5DQ9NZD1 345 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TMOD2Q9NZR1 351 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 KIAA1257Q9ULG3 409 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 DCCP43146 1447 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TNS3Q68CZ2 1445 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 SPEF2Q9C093 1822 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 hCG_1642624A0A1W2PR95 340 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 A0A1W2PRG0 241 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 A6NL46 340 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CDK2AP1O14519 115 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ARHGAP33O14559 1287 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CASQ2O14958 399 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 MCF2LO15068 1137 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CYP26A1O43174 497 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CAMTA2O94983 1202 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CHEK2O96017 543 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CTNNA2P26232 953 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 RPA3P35244 121 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 EPS15P42566 896 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ALDH3B2P48448 385 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 SLC18A1P54219 525 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 RASGRF1Q13972 1273 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 UBE4AQ14139 1066 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TMED2Q15363 201 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TRIP10Q15642 601 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TIGD2Q4W5G0 525 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 HERC4Q5GLZ8 1057 aaPredicted RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 IYDQ6PHW0 289 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 RHBDF2Q6PJF5 856 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CCDC81Q6ZN84 652 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CATIPQ7Z7H3 387 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 AMIGO2Q86SJ2 522 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms