RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MTMR3Q13615 1198 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 DHX34Q14147 1143 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 TFDP1Q14186 410 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 KCTD2Q14681 263 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 KYAT1Q16773 422 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ZACNQ401N2 412 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 MAEAQ7L5Y9 396 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 WFDC8Q8IUA0 241 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 CBWD2Q8IUF1 395 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 KSR1Q8IVT5 923 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ABRAQ8N0Z2 381 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PPM1KQ8N3J5 372 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 NLGN2Q8NFZ4 835 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 OLIG1Q8TAK6 271 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 SLC35G2Q8TBE7 412 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 HELQQ8TDG4 1101 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 MAIP1Q8WWC4 291 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PSPC1Q8WXF1 523 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 SEC14L1Q92503 715 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 LRRC45Q96CN5 670 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 BICD1Q96G01 975 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 FNBP1Q96RU3 617 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 CGRRF1Q99675 332 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 LRRC1Q9BTT6 524 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PACSIN1Q9BY11 444 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 NFKBIZQ9BYH8 718 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 IMPG2Q9BZV3 1241 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 WNT8AQ9H1J5 351 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 EPC1Q9H2F5 836 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PCIF1Q9H4Z3 704 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 BCAS3Q9H6U6 928 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 GPRC5CQ9NQ84 441 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 GDF3Q9NR23 364 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 RBM12Q9NTZ6 932 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 NOCTQ9UK39 431 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 AJAP1Q9UKB5 411 aaPredicted RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 AGO2Q9UKV8 859 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 HPCAL4Q9UM19 191 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PCDHB2Q9Y5E7 798 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 POLR2AP24928 1970 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 A0A0B4J269 797 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 IGKV6-21A0A0C4DH24 114 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 GSTTP1A0A1W2PQM5 241 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 IQCA1LA6NCM1 817 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA6BA6NDN3 693 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 TMCO5BA8MYB1 307 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ANKRD63C9JTQ0 380 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA8KD6RF30 607 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 NCK2O43639 380 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 CEP104O60308 925 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 BUB1BO60566 1050 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 HSF2BPO75031 334 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 TOM1L1O75674 476 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ERLIN2O94905 339 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 HEXIM1O94992 359 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 FTLP02792 175 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 CYP1A2P05177 515 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 HOXC6P09630 235 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ZBTB48P10074 688 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 CYP11B1P15538 503 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 GLRA2P23416 452 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 MAN1A1P33908 653 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 SLC1A1P43005 524 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 TNNT3P45378 269 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 DRG2P55039 364 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 YWHAEP62258 255 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 FKBP1BP68106 108 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 DLG4P78352 724 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 MAP2K1Q02750 393 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 SNAPC2Q13487 334 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ENOX2Q16206 610 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 ARHGAP44Q17R89 818 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 C11orf91Q3C1V1 193 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 MTERF2Q49AM1 385 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 CFAP58Q5T655 872 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 TAF3Q5VWG9 929 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 CDCA2Q69YH5 1023 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 SLC39A4Q6P5W5 647 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 GJB7Q6PEY0 223 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 GADL1Q6ZQY3 521 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 CYFIP1Q7L576 1253 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 CROCCP2Q86T23 111 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 PNMA8AQ86V59 439 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 NCAPG2Q86XI2 1143 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 WDR49Q8IV35 697 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ARHGEF19Q8IW93 802 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ZBTB8OSQ8IWT0 167 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 METTL13Q8N6R0 699 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 PLEKHO2Q8TD55 490 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ATP8B4Q8TF62 1192 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 BSNDQ8WZ55 320 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 CEP89Q96ST8 783 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 RUFY1Q96T51 708 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 MRPL4Q9BYD3 311 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 RAB17Q9H0T7 212 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 SMG9Q9H0W8 520 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 ASCC2Q9H1I8 757 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 SMARCAD1Q9H4L7 1026 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 TAF1DQ9H5J8 278 aaPredicted RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 PDE11AQ9HCR9 933 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms