RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 GREM2Q9H772 168 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 ATAD3AQ9NVI7 634 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 RRN3Q9NYV6 651 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 IGSF9Q9P2J2 1179 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 FETUBQ9UGM5 382 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 CARD8Q9Y2G2 431 aa8.56□□□□□ -1.04
CSDE1-214ENST00000530886 SPTLC1O15269 473 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 DKC1O60832 514 aaKnown RBP eCLIP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CNOT3O75175 753 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 PARNO95453 639 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 C8BP07358 591 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 DLDP09622 509 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 PHBP35232 272 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 TLR1Q15399 786 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CENPUQ71F23 418 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 RHOT2Q8IXI1 618 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CCDC105Q8IYK2 499 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 ZBTB38Q8NAP3 1195 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 ICA1LQ8NDH6 482 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GDPD5Q8WTR4 605 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 MTBPQ96DY7 904 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 TTC1Q99614 292 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 OSGEPQ9NPF4 335 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GIN1Q9NXP7 522 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 ADAMTS6Q9UKP5 1117 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CLASP2O75122 1294 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 DGKIO75912 1065 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 MTA2O94776 668 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 USP1O94782 785 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CAPNS1P04632 268 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF23P17027 643 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 PRDX6P30041 224 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 RPA3P35244 121 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 TNIP1Q15025 636 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 SLC1A5Q15758 541 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 MAPK6Q16659 721 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 PTPROQ16827 1216 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 EDRF1Q3B7T1 1238 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 SPOPLQ6IQ16 392 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 ANKS1BQ7Z6G8 1248 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CCDC25Q86WR0 208 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 BBOF1Q8ND07 529 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 LNX1Q8TBB1 728 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 U2AF1L4Q8WU68 220 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CD101Q93033 1021 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GRIP2Q9C0E4 1043 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GPR88Q9GZN0 384 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF287Q9HBT7 754 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 B3GNT3Q9Y2A9 372 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 TM9SF1O15321 606 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 DNAJA2O60884 412 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 TPPPO94811 219 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CHRNB2P17787 502 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GNA11P29992 359 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 NCKAP1LP55160 1127 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 MYBPC1Q00872 1141 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 HERC4Q5GLZ8 1057 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 SEL1L2Q5TEA6 688 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CHSY1Q86X52 802 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 SLC13A5Q86YT5 568 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 RBM15BQ8NDT2 890 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 SH3RF3Q8TEJ3 882 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 OXNAD1Q96HP4 312 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 CTRCQ99895 268 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 RTFDC1Q9BY42 306 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 MRPL1Q9BYD6 325 aaKnown RBP8.55□□□□□ -1.04
CSDE1-214ENST00000530886 WNT8AQ9H1J5 351 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 KIAA1586Q9HCI6 787 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GNPTGQ9UJJ9 305 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 NOX1Q9Y5S8 564 aa8.55□□□□□ -1.04
CSDE1-214ENST00000530886 GTPBP10A4D1E9 387 aaKnown RBP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 B2RBV5 119 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ADCY6O43306 1168 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 BAG2O95816 211 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 INHBBP09529 407 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 OCM2P0CE71 109 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 OCMP0CE72 109 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 PON1P27169 355 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 NSUN2Q08J23 767 aaKnown RBP eCLIP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 IFIT5Q13325 482 aaKnown RBP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF211Q13398 564 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 EFHC1Q5JVL4 640 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 C1orf146Q5VVC0 180 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 METTL21CQ5VZV1 264 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 ANO5Q75V66 913 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 FRMD5Q7Z6J6 570 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 DDHD1Q8NEL9 900 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 CLIP3Q96DZ5 547 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 RANBP9Q96S59 729 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 PLIN2Q99541 437 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 OLFM1Q99784 485 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 GPATCH1Q9BRR8 931 aaKnown RBP8.54□□□□□ -1.04
CSDE1-214ENST00000530886 HAUS8Q9BT25 410 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 TMEM120AQ9BXJ8 343 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
CSDE1-214ENST00000530886 NFASCO94856 1347 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms