RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ADALQ6DHV7 355 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 ARMCX5Q6P1M9 558 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 DYMQ7RTS9 669 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 CD302Q8IX05 232 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 PSMG2Q969U7 264 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 EPSTI1Q96J88 318 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 LRRC3BQ96PB8 259 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 SEPT5Q99719 369 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 EPC1Q9H2F5 836 aa22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 RBM12Q9NTZ6 932 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-219ENST00000530404 ANO9A1A5B4 782 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 TULP1O00294 542 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 CHRNB1P11230 501 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 SATB1Q01826 763 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 GAS6Q14393 721 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 LPAL2Q16609 132 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 MGAT5BQ3V5L5 792 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 WDR44Q5JSH3 913 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 GPR158Q5T848 1215 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 SFR1Q86XK3 245 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 FAM200AQ8TCP9 573 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 TSPAN18Q96SJ8 248 aa22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 AGO2Q9UKV8 859 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-219ENST00000530404 VPS37CA5D8V6 355 aaPredicted RBP22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 CYB561D2O14569 222 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 CHADO15335 359 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 KPNA1P52294 538 aaPredicted RBP22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 PUM1Q14671 1186 aaKnown RBP eCLIP22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 BRAPQ7Z569 592 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 EFCAB13Q8IY85 973 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 GIPC2Q8TF65 315 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 E2F7Q96AV8 911 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 PYM1Q9BRP8 204 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 ZCWPW1Q9H0M4 648 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 DPP3Q9NY33 737 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 ASB3Q9Y575 518 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 CLIC4Q9Y696 253 aa22.44■■□□□ 1.18
TSPAN4-219ENST00000530404 HELZP42694 1942 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 BMP15O95972 392 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 CYP11A1P05108 521 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 ATF6P18850 670 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 SCP2P22307 547 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 DDIT3P35638 169 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 FCHO2Q0JRZ9 810 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 TXNDC11Q6PKC3 985 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 BORCS6Q96GS4 357 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 CCSER1Q9C0I3 900 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 SMG9Q9H0W8 520 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 DLL3Q9NYJ7 618 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 GTSE1Q9NYZ3 720 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 DERAQ9Y315 318 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 SPTBN2O15020 2390 aa22.43■■□□□ 1.18
TSPAN4-219ENST00000530404 SDK1Q7Z5N4 2213 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 PTPRDP23468 1912 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 DPYSL4O14531 572 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 PRAMEF12O95522 483 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 MCM2P49736 904 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 TAF6P49848 677 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 CCR3P51677 355 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 WNT7BP56706 349 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 DMWDQ09019 674 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 KCNA1Q09470 495 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 WSCD1Q658N2 575 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 CRELD2Q6UXH1 353 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 Q6ZS52 159 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 ITIH5Q86UX2 942 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 LRRTM3Q86VH5 581 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 METTL23Q86XA0 190 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 KRI1Q8N9T8 703 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 STKLD1Q8NE28 680 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 ZSWIM2Q8NEG5 633 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 POMGNT1Q8WZA1 660 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 ASB7Q9H672 318 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 TBC1D7Q9P0N9 293 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 C2CD2Q9Y426 696 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 KIAA1549LQ6ZVL6 1849 aa22.42■■□□□ 1.18
TSPAN4-219ENST00000530404 SPECC1L-ADORA2AF8WAN1 911 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 ADSSP30520 456 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 ARHGAP15Q53QZ3 475 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 SLFN12LQ6IEE8 588 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 ZNF720Q7Z2F6 126 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 SECISBP2LQ93073 1101 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 CLIC6Q96NY7 704 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 FAM126AQ9BYI3 521 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 ST6GALNAC4Q9H4F1 302 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 UPF2Q9HAU5 1272 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 IL21Q9HBE4 155 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 ABI2Q9NYB9 513 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 USP18Q9UMW8 372 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 STYXL1Q9Y6J8 313 aa22.41■■□□□ 1.18
TSPAN4-219ENST00000530404 HOXC13P31276 330 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 CXCL12P48061 93 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 TNK2Q07912 1038 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 PPP2R5DQ14738 602 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 VEPH1Q14D04 833 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 PON2Q15165 354 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 PTPAQ15257 358 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 SCARA3Q6AZY7 606 aa22.4■■□□□ 1.18
TSPAN4-219ENST00000530404 FAM173BQ6P4H8 233 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms