RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 MTMR11A4FU01 709 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 FAM86C2PA6NEL3 165 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 PRR33A8MZF0 331 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 KINO60870 393 aaKnown RBP18.35■□□□□ 0.53
CCS-205ENST00000530384 AP3M2P53677 418 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 NTHL1P78549 312 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 SIGLEC14Q08ET2 396 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 IQCEQ6IPM2 695 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 CENPPQ6IPU0 288 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 DPH6Q7L8W6 267 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 UBALD2Q8IYN6 164 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 DCP1BQ8IZD4 617 aaKnown RBP18.35■□□□□ 0.53
CCS-205ENST00000530384 PDCL2Q8N4E4 241 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 C2orf15Q8WU43 125 aaKnown RBP18.35■□□□□ 0.53
CCS-205ENST00000530384 SMARCE1Q969G3 411 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 PGLYRP2Q96PD5 576 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 TMEM209Q96SK2 561 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 RTP3Q9BQQ7 232 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 LRFN3Q9BTN0 628 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 AVENQ9NQS1 362 aaPredicted RBP18.35■□□□□ 0.53
CCS-205ENST00000530384 HCFC1R1Q9NWW0 138 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 L1RE1Q9UN81 338 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 YIPF1Q9Y548 306 aa18.35■□□□□ 0.53
CCS-205ENST00000530384 TECTAO75443 2155 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 MAPK13O15264 365 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 VNN2O95498 520 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 ASGR2P07307 311 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 RHOP08100 348 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 LAMP2P13473 410 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 RPL13P26373 211 aaKnown RBP18.34■□□□□ 0.53
CCS-205ENST00000530384 MYL7Q01449 175 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 TSPY1Q01534 308 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 TWF1Q12792 350 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 DUSP4Q13115 394 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 SLC39A12Q504Y0 691 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 CEP135Q66GS9 1140 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 TRIM67Q6ZTA4 783 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 SPATA20Q8TB22 786 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 PARD3BQ8TEW8 1205 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 NXPE3Q969Y0 559 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 ZNF512Q96ME7 567 aaPredicted RBP18.34■□□□□ 0.53
CCS-205ENST00000530384 GZF1Q9H116 711 aaPredicted RBP18.34■□□□□ 0.53
CCS-205ENST00000530384 KCNK12Q9HB15 430 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 CDH7Q9ULB5 785 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 PCDHA5Q9Y5H7 936 aa18.34■□□□□ 0.53
CCS-205ENST00000530384 NR2F2P24468 414 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 ALDH1A3P47895 512 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 LHX1P48742 406 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 CASP4P49662 377 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 EPHB3P54753 998 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 CLDN10P78369 228 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 TRPC3Q13507 836 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 COBLL1Q53SF7 1204 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 ZNF658Q5TYW1 1059 aaPredicted RBP18.33■□□□□ 0.52
CCS-205ENST00000530384 ADGRF2Q8IZF7 708 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 LEMD2Q8NC56 503 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 SPPL2BQ8TCT7 592 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 TMC2Q8TDI7 906 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 ZNF516Q92618 1163 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 ACBD6Q9BR61 282 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 CORO1BQ9BR76 489 aa18.33■□□□□ 0.52
CCS-205ENST00000530384 DDX43Q9NXZ2 648 aaKnown RBP18.33■□□□□ 0.52
CCS-205ENST00000530384 MRPS23Q9Y3D9 190 aaKnown RBP18.33■□□□□ 0.52
CCS-205ENST00000530384 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
CCS-205ENST00000530384 ZNF197O14709 1029 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 PHACTR2O75167 634 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 GADD45BO75293 160 aaPredicted RBP18.32■□□□□ 0.52
CCS-205ENST00000530384 CST3P01034 146 aaPredicted RBP18.32■□□□□ 0.52
CCS-205ENST00000530384 PCSK1P29120 753 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 ATICP31939 592 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 TUFMP49411 452 aaKnown RBP18.32■□□□□ 0.52
CCS-205ENST00000530384 TDGQ13569 410 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 SOWAHAQ2M3V2 549 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 EDRF1Q3B7T1 1238 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 CYP4A22Q5TCH4 519 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 LIMS2Q7Z4I7 341 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 ITFG1Q8TB96 612 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 PLEKHO2Q8TD55 490 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 FGF13Q92913 245 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 CEP72Q9P209 647 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 ASB3Q9Y575 518 aa18.32■□□□□ 0.52
CCS-205ENST00000530384 GABRDO14764 452 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 IKBKBO14920 756 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 MICAL2O94851 1124 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
CCS-205ENST00000530384 ADAM9Q13443 819 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 BIRC3Q13489 604 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 NFE2Q16621 373 aaPredicted RBP18.31■□□□□ 0.52
CCS-205ENST00000530384 ZCWPW2Q504Y3 356 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 INTS8Q75QN2 995 aaKnown RBP18.31■□□□□ 0.52
CCS-205ENST00000530384 PDZD4Q76G19 769 aaPredicted RBP18.31■□□□□ 0.52
CCS-205ENST00000530384 LRRTM3Q86VH5 581 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 SMYD4Q8IYR2 804 aaPredicted RBP18.31■□□□□ 0.52
CCS-205ENST00000530384 SYAP1Q96A49 352 aaPredicted RBP18.31■□□□□ 0.52
CCS-205ENST00000530384 CRISPLD1Q9H336 500 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 ASAH2Q9NR71 780 aa18.31■□□□□ 0.52
CCS-205ENST00000530384 GDE1Q9NZC3 331 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms