RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 BSNDQ8WZ55 320 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 LENG9Q96B70 501 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 KIF9Q9HAQ2 790 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 NID2Q14112 1375 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 GTPBP10A4D1E9 387 aaKnown RBP13□□□□□ -0.33
SCN3B-206ENST00000530277 M0QZ92 97 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 RIPK2O43353 540 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 PRKCIP41743 596 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 TAF12Q16514 161 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 TRIM55Q9BYV6 548 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 NAALADL1Q9UQQ1 740 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 R3HDM2Q9Y2K5 976 aaKnown RBP13□□□□□ -0.33
SCN3B-206ENST00000530277 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 FAM47DPA6NHR8 397 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 KRT7P08729 469 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 RARGP13631 454 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 SCTRP47872 440 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 EML3Q32P44 896 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 CYB5D1Q6P9G0 228 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 USP33Q8TEY7 942 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 ASNSD1Q9NWL6 643 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 HAO1Q9UJM8 370 aa13□□□□□ -0.33
SCN3B-206ENST00000530277 TPX2Q9ULW0 747 aaKnown RBP13□□□□□ -0.33
SCN3B-206ENST00000530277 IGLV3-22A0A075B6J6 115 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 KIAA0391O15091 583 aaKnown RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 SUPT20HL2P0C7V6 817 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 HOXD13P35453 343 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 BMPR2Q13873 1038 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 ABCF3Q9NUQ8 709 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 TSR3Q9UJK0 312 aaKnown RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 OSBPP22059 807 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 TTLL4Q14679 1199 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 CLEC16AQ2KHT3 1053 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 SGSM1Q2NKQ1 1148 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 ASAP3Q8TDY4 903 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 RANBP17Q9H2T7 1088 aaKnown RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 C12orf65Q9H3J6 166 aaKnown RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 UMODL1Q5DID0 1318 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 A0A087WZ62 844 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 GZMAP12544 262 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 SNX16P57768 344 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 TRMT10CQ7L0Y3 403 aaKnown RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 SMC1BQ8NDV3 1235 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 CDKL2Q92772 493 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 FAM111AQ96PZ2 611 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 TMEM237Q96Q45 408 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 APOL2Q9BQE5 337 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 FDXACB1Q9BRP7 624 aaPredicted RBP12.99□□□□□ -0.33
SCN3B-206ENST00000530277 KLC2Q9H0B6 622 aa12.99□□□□□ -0.33
SCN3B-206ENST00000530277 IQANK1A0A1B0GTG1 560 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 OPHN1O60890 802 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 KRT37O76014 449 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 MYL3P08590 195 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 SOX11P35716 441 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ARFIP2P53365 341 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ALDH18A1P54886 795 aaKnown RBP12.98□□□□□ -0.33
SCN3B-206ENST00000530277 BIRC2Q13490 618 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 AGBL3Q8NEM8 1001 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 FAM161BQ96MY7 647 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 UNKQ9C0B0 810 aaKnown RBP12.98□□□□□ -0.33
SCN3B-206ENST00000530277 FHDC1Q9C0D6 1143 aaPredicted RBP12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 IGKV6D-41A0A0C4DH26 115 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 LOC100653049A0A140TA62 436 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 O00370 1275 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 KRT34O76011 436 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 GH1P01241 217 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ANXA13P27216 316 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 SLC1A1P43005 524 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 RAD23BP54727 409 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 PRCCQ92733 491 aaPredicted RBP12.98□□□□□ -0.33
SCN3B-206ENST00000530277 HPDLQ96IR7 371 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 TXLNGQ9NUQ3 528 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ARL2BPQ9Y2Y0 163 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 HES2Q9Y543 173 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 PROSCO94903 275 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
SCN3B-206ENST00000530277 TAS2R40P59535 323 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 TFDP2Q14188 446 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 STAT4Q14765 748 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 HEATR6Q6AI08 1181 aaKnown RBP12.98□□□□□ -0.33
SCN3B-206ENST00000530277 DSTYKQ6XUX3 929 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 CNPY4Q8N129 248 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 DAW1Q8N136 415 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 HES6Q96HZ4 224 aa12.98□□□□□ -0.33
SCN3B-206ENST00000530277 ZC3H7BQ9UGR2 993 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms