RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 VGLL2Q8N8G2 317 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 ACAP3Q96P50 834 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 MOV10L1Q9BXT6 1211 aaKnown RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 PUS3Q9BZE2 481 aaKnown RBP8.14□□□□□ -1.11
SVIP-204ENST00000530199 CTNNA3Q9UI47 895 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 ANKRD6Q9Y2G4 727 aa8.14□□□□□ -1.11
SVIP-204ENST00000530199 CEP250Q9BV73 2442 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 MYADML2A6NDP7 307 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 RHBDL3P58872 404 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 ERVFRD-1P60508 538 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 NKX3-2P78367 333 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 JAG1P78504 1218 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 CXorf57Q6NSI4 855 aaKnown RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 TP53INP2Q8IXH6 220 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 ASB15Q8WXK1 588 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 MRPL38Q96DV4 380 aaKnown RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 TGS1Q96RS0 853 aaKnown RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 PCGF6Q9BYE7 350 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 MROH8Q9H579 483 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 RC3H2Q9HBD1 1191 aaKnown RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 CCM2LQ9NUG4 571 aaPredicted RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 RALYQ9UKM9 306 aaKnown RBP8.13□□□□□ -1.11
SVIP-204ENST00000530199 GIT1Q9Y2X7 761 aa8.13□□□□□ -1.11
SVIP-204ENST00000530199 KLHL33A6NCF5 533 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 GOLGA6CA6NDK9 693 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 GOLGA6BA6NDN3 693 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 MBTPS2O43462 519 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 WNT11O96014 354 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 MMEP08473 750 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 ZNF853P0CG23 659 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 GOLGA6DP0CG33 693 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 PF4V1P10720 104 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 FGFR2P21802 821 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
SVIP-204ENST00000530199 CXorf67Q86X51 503 aaPredicted RBP8.12□□□□□ -1.11
SVIP-204ENST00000530199 TPH2Q8IWU9 490 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 TGFBRAP1Q8WUH2 860 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 FOXRED1Q96CU9 486 aaPredicted RBP8.12□□□□□ -1.11
SVIP-204ENST00000530199 GBP4Q96PP9 640 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 SPATC1LQ9H0A9 340 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 UPF3AQ9H1J1 476 aaKnown RBP8.12□□□□□ -1.11
SVIP-204ENST00000530199 SEMA4AQ9H3S1 761 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 GOLGA6AQ9NYA3 693 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 KCNG1Q9UIX4 513 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 FAM184BQ9ULE4 1060 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 PNMA8BQ9ULN7 279 aaPredicted RBP8.12□□□□□ -1.11
SVIP-204ENST00000530199 FRYLO94915 3013 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 UNC79Q9P2D8 2635 aa8.12□□□□□ -1.11
SVIP-204ENST00000530199 MYH13Q9UKX3 1938 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 XPOTO43592 962 aaKnown RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 NCK2O43639 380 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 BAIAP3O94812 1187 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 IFIT1P09914 478 aaKnown RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 FAHP16930 419 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 ENPP1P22413 925 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 RFC2P35250 354 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 GJA9P57773 515 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 SLC9A5Q14940 896 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 NR1I3Q14994 352 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 CLUL1Q15846 466 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 FSCN1Q16658 493 aaKnown RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 ZNF792Q3KQV3 632 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 CMTR2Q8IYT2 770 aaKnown RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 MSL3Q8N5Y2 521 aaKnown RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 ABHD4Q8TB40 342 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 RNF32Q9H0A6 362 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 DBR1Q9UK59 544 aaKnown RBP8.11□□□□□ -1.11
SVIP-204ENST00000530199 ZBTB21Q9ULJ3 1066 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 MYH2Q9UKX2 1941 aa8.11□□□□□ -1.11
SVIP-204ENST00000530199 COL11A1P12107 1806 aaPredicted RBP8.1□□□□□ -1.11
SVIP-204ENST00000530199 SIP14410 1827 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 GPR75-ASB3A0A0A6YYF3 556 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 LOC730098B7Z3J9 87 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 CABYRO75952 493 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 MPOP05164 745 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 FCER1AP12319 257 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 VCAM1P19320 739 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 SDHBP21912 280 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 BTDP43251 543 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 USP14P54578 494 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 SMAD4Q13485 552 aaKnown RBP8.1□□□□□ -1.11
SVIP-204ENST00000530199 METTL24Q5JXM2 366 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 ESPNLQ6ZVH7 1005 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 PHYKPLQ8IUZ5 450 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 ZGPATQ8N5A5 531 aaKnown RBP8.1□□□□□ -1.11
SVIP-204ENST00000530199 C7orf31Q8N865 590 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 DNAAF4Q8WXU2 420 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 ERCC4Q92889 916 aaPredicted RBP8.1□□□□□ -1.11
SVIP-204ENST00000530199 TSPAN17Q96FV3 270 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 KIAA1683Q9H0B3 1180 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 DNAJC28Q9NX36 388 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 HOXC10Q9NYD6 342 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 CNPY2Q9Y2B0 182 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 ASB1Q9Y576 335 aa8.1□□□□□ -1.11
SVIP-204ENST00000530199 FLNBO75369 2602 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms