RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ENTPD3O75355 529 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 PARNO95453 639 aaKnown RBP6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 CT47B1P0C2W7 299 aaPredicted RBP6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 OSMP13725 252 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 HNRNPLP14866 589 aaKnown RBP eCLIP6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 CAPN2P17655 700 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 ETV4P43268 484 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 PHKA1P46020 1223 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 GJA9P57773 515 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 CDK17Q00537 523 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 SLFN5Q08AF3 891 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 ADAM15Q13444 863 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 ACAP1Q15027 740 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 PCOLCEQ15113 449 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 CLUL1Q15846 466 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 GAREM2Q75VX8 874 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 SCYL3Q8IZE3 742 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 ACAP3Q96P50 834 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 SLC2A13Q96QE2 648 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 SOX7Q9BT81 388 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 IDI2Q9BXS1 227 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 API5Q9BZZ5 524 aaKnown RBP6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 DNAJC28Q9NX36 388 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 MTMR10Q9NXD2 777 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 DPP7Q9UHL4 492 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 FBXO10Q9UK96 956 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 ADAM29Q9UKF5 820 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 PCDHB6Q9Y5E3 794 aa6.14□□□□□ -1.43
AMBRA1-209ENST00000529963 GAKO14976 1311 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 PDS5AQ29RF7 1337 aaKnown RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 RPTORQ8N122 1335 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 MYH13Q9UKX3 1938 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 A0A0G2JLL6 359 aaPredicted RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 K7ESF4 209 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 CUTAO60888 179 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 GJB1P08034 283 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 CCL5P13501 91 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 CTGFP29279 349 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 EXOSC10Q01780 885 aaKnown RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 PRKCZQ05513 592 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 TBR1Q16650 682 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 PTPN21Q16825 1174 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 INAVAQ3KP66 663 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 SPTY2D1Q68D10 685 aaPredicted RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 GADL1Q6ZQY3 521 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 BMP8AQ7Z5Y6 402 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 PRRT2Q7Z6L0 340 aaPredicted RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 KBTBD2Q8IY47 623 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 KLHL36Q8N4N3 616 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 GAB3Q8WWW8 586 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 AJUBAQ96IF1 538 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 GOLGA2P5Q9HBQ8 144 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 LUC7LQ9NQ29 371 aaKnown RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 POLR3BQ9NW08 1133 aaPredicted RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 ABCF2Q9UG63 623 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 EVLQ9UI08 416 aaPredicted RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 PRSS50Q9UI38 385 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 SLC45A1Q9Y2W3 748 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 LRRFIP2Q9Y608 721 aaKnown RBP6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 NUMBLQ9Y6R0 609 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 DUSP10Q9Y6W6 482 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 ZHX2Q9Y6X8 837 aa6.13□□□□□ -1.43
AMBRA1-209ENST00000529963 AK9Q5TCS8 1911 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 ATRNL1Q5VV63 1379 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 RANBP2P49792 3224 aaKnown RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 B4GALT3O60512 393 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 CTNND1O60716 968 aaKnown RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 ADORA1P30542 326 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 MRE11P49959 708 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 USP10Q14694 798 aaKnown RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 MVPQ14764 893 aaKnown RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 TRIM68Q6AZZ1 485 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 SLC41A1Q8IVJ1 513 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 ZFPM1Q8IX07 1006 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 CDYL2Q8N8U2 506 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 C1orf162Q8NEQ5 155 aaPredicted RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 HIST1H2AHQ96KK5 128 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 HIST1H2AJQ99878 128 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 FDXACB1Q9BRP7 624 aaPredicted RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 MENTQ9BUN1 341 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 NOB1Q9ULX3 412 aaKnown RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 PA2G4Q9UQ80 394 aaKnown RBP6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 PIEZO1Q92508 2521 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 RFX7Q2KHR2 1363 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 ZSWIM8A7E2V4 1837 aa6.12□□□□□ -1.43
AMBRA1-209ENST00000529963 MROH7-TTC4A0A0A0MT08 1334 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 OTOL1A6NHN0 477 aaPredicted RBP6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 MAP4K4O95819 1239 aaPredicted RBP6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 GNAI3P08754 354 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 BTDP43251 543 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 MEOX1P50221 254 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 GSTO1P78417 241 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 JAG1P78504 1218 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 PICALMQ13492 652 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 ACAP2Q15057 778 aa6.11□□□□□ -1.43
AMBRA1-209ENST00000529963 LRIT3Q3SXY7 679 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms