RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SPAARA0A1B0GVQ0 90 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 PSMA5P28066 241 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 TUFMP49411 452 aaKnown RBP12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 PDGFRLQ15198 375 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 TRIM61Q5EBN2 209 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 SLC23A3Q6PIS1 610 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 RASSF3Q86WH2 238 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 CMTM8Q8IZV2 173 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 CHCHD4Q8N4Q1 142 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 TSTD1Q8NFU3 115 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 PIGKQ92643 395 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 ZNF274Q96GC6 653 aaPredicted RBP12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 GCNAQ96QF7 691 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 ACO2Q99798 780 aaKnown RBP12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 CACNA2D2Q9NY47 1150 aa12.69□□□□□ -0.38
AMBRA1-207ENST00000529553 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 MCF2P10911 925 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 ENGP17813 658 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 HOXD12P35452 270 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 DHPSP49366 369 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 SCAPQ12770 1279 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CALCRLQ16602 461 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 PADI6Q6TGC4 694 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 SYT12Q8IV01 421 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CEP120Q8N960 986 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 C18orf25Q96B23 403 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CNOT6LQ96LI5 555 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 PGLYRP2Q96PD5 576 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CDT1Q9H211 546 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 CCDC86Q9H6F5 360 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 KIF9Q9HAQ2 790 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 TDP1Q9NUW8 608 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
AMBRA1-207ENST00000529553 LOC400499M0QZD8 3231 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 ADAMTS20P59510 1910 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 MTMR11A4FU01 709 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 ZIC2O95409 532 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 SEC24BO95487 1268 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 PAX3P23760 479 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 GJA4P35212 333 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 AVPR1AP37288 418 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 TXKP42681 527 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 AARSP49588 968 aaKnown RBP eCLIP12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 OSTNP61366 133 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 ZNF268Q14587 947 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 VEPH1Q14D04 833 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 LPCAT2Q7L5N7 544 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 USP37Q86T82 979 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 HDDC3Q8N4P3 179 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 ATAD1Q8NBU5 361 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 OLIG1Q8TAK6 271 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 CEP76Q8TAP6 659 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 CD101Q93033 1021 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 BBC3Q96PG8 261 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 IL21Q9HBE4 155 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 INVSQ9Y283 1065 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 ARID2Q68CP9 1835 aa12.67□□□□□ -0.38
AMBRA1-207ENST00000529553 PCNX2A6NKB5 2137 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 OR4Q2P0C623 313 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 TYMPP19971 482 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 BCKDHBP21953 392 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 MUTP22033 750 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 PROZP22891 400 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 LRPAP1P30533 357 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 HSPA4P34932 840 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 CYP4F8P98187 520 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 BFSP1Q12934 665 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 ZNF568Q3ZCX4 644 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 BMP2KLQ5H9B9 411 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 EARS2Q5JPH6 523 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 PEAR1Q5VY43 1037 aaPredicted RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 TRIM68Q6AZZ1 485 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 CCNI2Q6ZMN8 369 aaPredicted RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 CPA6Q8N4T0 437 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 USP13Q92995 863 aaPredicted RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 ECT2Q9H8V3 914 aa12.66□□□□□ -0.38
AMBRA1-207ENST00000529553 ARHGEF35A5YM69 484 aa12.65□□□□□ -0.38
AMBRA1-207ENST00000529553 MAP3K13O43283 966 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms