RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 VIMP08670 466 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 MYBL1P10243 752 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ATP4AP20648 1035 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 RFC5P40937 340 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 APLP1P51693 650 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 CLDN10P78369 228 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 CENPCQ03188 943 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ITIH4Q14624 930 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ZACNQ401N2 412 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 TDRD10Q5VZ19 366 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 IQSEC1Q6DN90 963 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 ZNF677Q86XU0 584 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 USP6NLQ92738 828 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 FAM81BQ96LP2 452 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 SERPINB12Q96P63 405 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 FAM118BQ9BPY3 351 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 CD248Q9HCU0 757 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 KCNG1Q9UIX4 513 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 NEU2Q9Y3R4 380 aa16.73■□□□□ 0.27
TM9SF1-208ENST00000529332 EXTL3O43909 919 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ECM2O94769 699 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 PROSCO94903 275 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 TTC4O95801 387 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 C4BPAP04003 597 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 RALAP11233 206 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ACO1P21399 889 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ADCYAP1R1P41586 468 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 NSFP46459 744 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 FCGRTP55899 365 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 RTP1P59025 263 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 NLRP11P59045 1033 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 KLF1Q13351 362 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 LRRC14Q15048 493 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 KYNUQ16719 465 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 OLFML2BQ68BL8 750 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 CYB5D1Q6P9G0 228 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 SYDE1Q6ZW31 735 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ANKS4BQ8N8V4 417 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 PPTC7Q8NI37 304 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 MAIP1Q8WWC4 291 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 SLC7A3Q8WY07 619 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ARHGEF2Q92974 986 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 VNN1O95497 513 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 SSTR3P32745 418 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 MAN1A1P33908 653 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 VPS41P49754 854 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 TAS2R40P59535 323 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 XRCC4Q13426 336 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 EMC2Q15006 297 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 PSMD6Q15008 389 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ANKS1BQ7Z6G8 1248 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 PASD1Q8IV76 773 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 EXOC8Q8IYI6 725 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 ATL2Q8NHH9 583 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 TRIM11Q96F44 468 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 HAPLN2Q9GZV7 340 aa16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
TM9SF1-208ENST00000529332 TMEM120BA0PK00 339 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 DNAJC8O75937 253 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 ATF2P15336 505 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 TNNI1P19237 187 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 YY1P25490 414 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 ABCD1P33897 745 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 ACOT2P49753 483 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 LIG4P49917 911 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 PTP4A2Q12974 167 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 WDR44Q5JSH3 913 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 MGARPQ8TDB4 240 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 GRK7Q8WTQ7 553 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 IFT74Q96LB3 600 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 C11orf70Q9BRQ4 267 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■■□□ 15
TM9SF1-208ENST00000529332 NINJ2Q9NZG7 142 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 SAMD15Q9P1V8 674 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
TM9SF1-208ENST00000529332 H0YCG3 227 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 AOC2O75106 756 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 GAS8O95995 478 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 ADCY8P40145 1251 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 PIK3CAP42336 1068 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 CRELD2Q6UXH1 353 aaPredicted RBP16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 SGSM3Q96HU1 749 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 FNBP1Q96RU3 617 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 TRAIPQ9BWF2 469 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 DHX33Q9H6R0 707 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 HOMER3Q9NSC5 361 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 ERAP1Q9NZ08 941 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 CYP2B6P20813 491 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 BPIFB4P59827 614 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 NOMO3P69849 1222 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 MAMLD1Q13495 774 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 TAX1BP1Q86VP1 789 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 PARP9Q8IXQ6 854 aa16.7■□□□□ 0.26
TM9SF1-208ENST00000529332 CYP4X1Q8N118 509 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms