RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 DEFB124Q8NES8 71 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 SPATA18Q8TC71 538 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 RSPH1Q8WYR4 309 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 KIFAP3Q92845 792 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 ZNF707Q96C28 371 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-212ENST00000528930 CCDC51Q96ER9 411 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 PRIMPOLQ96LW4 560 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 PLIN2Q99541 437 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 KIFC3Q9BVG8 833 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 MRPL9Q9BYD2 267 aaKnown RBP9.29□□□□□ -0.92
SSBP3-212ENST00000528930 NT5C3AQ9H0P0 336 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 NRDE2Q9H7Z3 1164 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 RSAD1Q9HA92 442 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 PRMT7Q9NVM4 692 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-212ENST00000528930 MIOSQ9NXC5 875 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 KCNK4Q9NYG8 393 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 USP20Q9Y2K6 914 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 HES2Q9Y543 173 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 PI4KAP42356 2102 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 CNTNAP2Q9UHC6 1331 aa9.29□□□□□ -0.92
SSBP3-212ENST00000528930 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 A0A087WV48 116 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 CCDC195A0A1B0GUA6 201 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 H0Y626 953 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 ACKR2O00590 384 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 INPPL1O15357 1258 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 SLC26A4O43511 780 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 HIP1RO75146 1068 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 DDHD2O94830 711 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 TRIM16O95361 564 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 GALTP07902 379 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 BMP2P12643 396 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 ITGA4P13612 1032 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 GUCY2CP25092 1073 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 HOXA6P31267 233 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 LONP1P36776 959 aaKnown RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 BCAR1P56945 870 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 NCBP1Q09161 790 aaKnown RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 GAS6Q14393 721 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 ZRSR1Q15695 479 aaKnown RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 ARSHQ5FYA8 562 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 SLC27A1Q6PCB7 646 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 GLB1LQ6UWU2 654 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 USP49Q70CQ1 688 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 DDX53Q86TM3 631 aaKnown RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 TMEM173Q86WV6 379 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 TMEM87AQ8NBN3 555 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 GSTCDQ8NEC7 633 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 TMEM169Q96HH4 297 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 IFT74Q96LB3 600 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 C2orf40Q9H1Z8 148 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 UBN1Q9NPG3 1134 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 MAN1C1Q9NR34 630 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 BLOC1S4Q9NUP1 217 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 DKK4Q9UBT3 224 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 DNAJB4Q9UDY4 337 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 FBXO2Q9UK22 296 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-212ENST00000528930 INPP5FQ9Y2H2 1132 aa9.28□□□□□ -0.92
SSBP3-212ENST00000528930 ARL5CA6NH57 179 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 CAPN8A6NHC0 703 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 SFI1A8K8P3 1242 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 CFAP99D6REC4 459 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 ZC3H11AO75152 810 aaKnown RBP eCLIP9.27□□□□□ -0.931e-8■□□□□ 9.1
SSBP3-212ENST00000528930 NPTXRO95502 500 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 POMCP01189 267 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 PRKCBP05771 671 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 PLA2G4BP0C869 781 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 AKAP5P24588 427 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 UBA7P41226 1012 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 NPTX2P47972 431 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 SLC11A1P49279 550 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 ALDH7A1P49419 539 aaKnown RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 PEX3P56589 373 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 PRPF4BQ13523 1007 aaKnown RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 AGERQ15109 404 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 MAPK6Q16659 721 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 NT5DC1Q5TFE4 455 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 EEF1DP3Q658K8 133 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 MTSS1LQ765P7 747 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 WDR5BQ86VZ2 330 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 HSCBQ8IWL3 235 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 DEPTORQ8TB45 409 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 SMG7Q92540 1137 aaKnown RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 EPSTI1Q96J88 318 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 DRC1Q96MC2 740 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 CLIC6Q96NY7 704 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 CDK15Q96Q40 435 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 GAD1Q99259 594 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 NTPCRQ9BSD7 190 aaKnown RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 TIPINQ9BVW5 301 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms