RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CDR2LQ86X02 465 aaPredicted RBP15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 PASD1Q8IV76 773 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 RCOR2Q8IZ40 523 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 NIPA2Q8N8Q9 360 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 C3orf20Q8ND61 904 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 GRK7Q8WTQ7 553 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 TMEM176AQ96HP8 235 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 SH3GL2Q99962 352 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 CHORDC1Q9UHD1 332 aaPredicted RBP15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 ADAM21Q9UKJ8 722 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 GJD2Q9UKL4 321 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 AGAP1Q9UPQ3 857 aa15.67■□□□□ 0.1
ECHDC1-220ENST00000528402 RALGAPA2Q2PPJ7 1873 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 TCRBV5S1A1TA0A578 114 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 ESYT3A0FGR9 886 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 AGPSO00116 658 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 CILPO75339 1184 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 CFHP08603 1231 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 ATF7P17544 494 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 COILP38432 576 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 MARCKSL1P49006 195 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 RAD23BP54727 409 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 PTPN11Q06124 597 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 INCA1Q0VD86 236 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 ACAP1Q15027 740 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 DCUN1D2Q6PH85 259 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 JAMLQ86YT9 394 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 BEST2Q8NFU1 509 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 FNIP1Q8TF40 1166 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 KIF12Q96FN5 646 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 DDX27Q96GQ7 796 aaKnown RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 RBM41Q96IZ5 413 aaKnown RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 GDAP1L1Q96MZ0 367 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 HINFPQ9BQA5 517 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 DDX56Q9NY93 547 aaKnown RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 VPS18Q9P253 973 aa15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 BARX2Q9UMQ3 279 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-220ENST00000528402 C17orf102A2RUQ5 167 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 ZSCAN5CA6NGD5 496 aaPredicted RBP15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 SIGLEC16A6NMB1 481 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 TNPO2O14787 897 aaKnown RBP15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 DAPK3O43293 454 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 ADCY6O43306 1168 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 RNF40O75150 1001 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 AKR1A1P14550 325 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 CD19P15391 556 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 HOXA11P31270 313 aaPredicted RBP15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 PTGIRP43119 386 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 CRYBB1P53674 252 aaPredicted RBP15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 SNX16P57768 344 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 KIZQ2M2Z5 673 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 PRAMEF19Q5SWL8 479 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 LRRC52Q8N7C0 313 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 C18orf8Q96DM3 657 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 TSPYL1Q9H0U9 437 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 NMRK2Q9NPI5 230 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 ST7Q9NRC1 585 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 FLRT1Q9NZU1 646 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 POLIQ9UNA4 740 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 NR2E1Q9Y466 385 aa15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.65■□□□□ 0.1
ECHDC1-220ENST00000528402 PASKQ96RG2 1323 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 DUSP11O75319 330 aaKnown RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 NPTXRO95502 500 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 CD4P01730 458 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM153BP0C7A2 387 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 RARAP10276 462 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 CYP2B6P20813 491 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 ECHS1P30084 290 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 TM4SF4P48230 202 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 LMNB2Q03252 620 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 DMTNQ08495 405 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 SIX1Q15475 284 aaPredicted RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 ZBTB6Q15916 424 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM153CQ494X1 144 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 ZNF394Q53GI3 561 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 PPP1R15BQ5SWA1 713 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 TAF2Q6P1X5 1199 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 SCARA5Q6ZMJ2 495 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 CCDC105Q8IYK2 499 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 WDTC1Q8N5D0 677 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 SLC4A11Q8NBS3 891 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 TSEN2Q8NCE0 465 aaKnown RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 TFAP2BQ92481 460 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 PPP1R16BQ96T49 567 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 ERVK-5Q9HDB9 667 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 MTRF1LQ9UGC7 380 aaKnown RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM153AQ9UHL3 310 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 UBQLN1Q9UMX0 589 aaKnown RBP15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
ECHDC1-220ENST00000528402 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 MEFVO15553 781 aaPredicted RBP15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 ECEL1O95672 775 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 ALDH1A1P00352 501 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 MYL3P08590 195 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM163BP0C2L3 166 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 HOXC8P31273 242 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms