RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ARHGEF19Q8IW93 802 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 FAM46DQ8NEK8 389 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 FBXO41Q8TF61 875 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 NEU4Q8WWR8 484 aaPredicted RBP7.22□□□□□ -1.25
PCF11-202ENST00000528336 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
PCF11-202ENST00000528336 TMEM125Q96AQ2 219 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 MRGPRX1Q96LB2 322 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 CNPPD1Q9BV87 410 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 SIK2Q9H0K1 926 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 HS3ST4Q9Y661 456 aa7.22□□□□□ -1.25
PCF11-202ENST00000528336 TOR1BO14657 336 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 TPP1O14773 563 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 PHGDHO43175 533 aaKnown RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 SUN1O94901 812 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 UNC5CO95185 931 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 NPR1P16066 1061 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 CHRM3P20309 590 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 SLC7A1P30825 629 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 POU6F2P78424 691 aaPredicted RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 MC2RQ01718 297 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 PREPLQ4J6C6 727 aaPredicted RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 EMC10Q5UCC4 262 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 RNF220Q5VTB9 566 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 ARMC6Q6NXE6 501 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 CHST15Q7LFX5 561 aaPredicted RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 SRGAP1Q7Z6B7 1085 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 CLNKQ7Z7G1 428 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 VRK3Q8IV63 474 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 LARP4BQ92615 738 aaKnown RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 SERHL2Q9H4I8 314 aa7.21□□□□□ -1.26
PCF11-202ENST00000528336 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 TESQ9UGI8 421 aaKnown RBP7.21□□□□□ -1.26
PCF11-202ENST00000528336 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 PRAMEF33A0A0G2JMD5 474 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 PRAMEF10O60809 474 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 ITGAMP11215 1152 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 VAV2P52735 878 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 IRX6P78412 446 aaPredicted RBP7.2□□□□□ -1.26
PCF11-202ENST00000528336 GALEQ14376 348 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 APOA5Q6Q788 366 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 USP51Q70EK9 711 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 GPR149Q86SP6 731 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 COLGALT2Q8IYK4 626 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 IL31RAQ8NI17 732 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 ASB10Q8WXI3 467 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 CCDC136Q96JN2 1154 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 BHMT2Q9H2M3 363 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 SMOC2Q9H3U7 446 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 UNKLQ9H9P5 680 aaKnown RBP7.2□□□□□ -1.26
PCF11-202ENST00000528336 TMEM74BQ9NUR3 256 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 USP19O94966 1318 aa7.2□□□□□ -1.26
PCF11-202ENST00000528336 TRGV11A0A075B6L2 103 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 MYADML2A6NDP7 307 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 KIF3BO15066 747 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 DNAJB5O75953 348 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 ZBED1O96006 694 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 GRPP07492 148 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
PCF11-202ENST00000528336 ANXA11P50995 505 aaKnown RBP7.19□□□□□ -1.26
PCF11-202ENST00000528336 DYRK1AQ13627 763 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 FAM160B1Q5W0V3 765 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 TAF2Q6P1X5 1199 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 DARS2Q6PI48 645 aaKnown RBP7.19□□□□□ -1.26
PCF11-202ENST00000528336 ZNF627Q7L945 461 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 LCORLQ8N3X6 602 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 PSD4Q8NDX1 1056 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 PTCD3Q96EY7 689 aaKnown RBP7.19□□□□□ -1.26
PCF11-202ENST00000528336 C22orf23Q9BZE7 217 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 SCAND2PQ9GZW5 306 aaPredicted RBP7.19□□□□□ -1.26
PCF11-202ENST00000528336 ETAA1Q9NY74 926 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 NEU2Q9Y3R4 380 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 PCDHGB6Q9Y5F9 930 aa7.19□□□□□ -1.26
PCF11-202ENST00000528336 BAZ1AQ9NRL2 1556 aaPredicted RBP7.18□□□□□ -1.26
PCF11-202ENST00000528336 A0A1W2PS29 197 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 PIM1P11309 404 aaPredicted RBP7.18□□□□□ -1.26
PCF11-202ENST00000528336 RHCEP18577 417 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 FDXRP22570 491 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 GDF5P43026 501 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 CACNB3P54284 484 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 RPS7P62081 194 aaKnown RBP7.18□□□□□ -1.26
PCF11-202ENST00000528336 RHDQ02161 417 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 BOP1Q14137 746 aaKnown RBP7.18□□□□□ -1.26
PCF11-202ENST00000528336 AMOTQ4VCS5 1084 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 ADGRG5Q8IZF4 528 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 POC1BQ8TC44 478 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 LRTOMTQ8WZ04 291 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 TTYH3Q9C0H2 523 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 CASS4Q9NQ75 786 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 TBCCD1Q9NVR7 557 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 SRRDQ9UH36 339 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 MED16Q9Y2X0 877 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.18□□□□□ -1.26
PCF11-202ENST00000528336 CC2D2AQ9P2K1 1620 aa7.18□□□□□ -1.26
PCF11-202ENST00000528336 PIPSLA2A3N6 862 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 GOLIM4O00461 696 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 BTN3A1O00481 513 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 HRGP04196 525 aa7.17□□□□□ -1.26
PCF11-202ENST00000528336 GATA3P23771 443 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms