RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ASAH2Q9NR71 780 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 GDAP2Q9NXN4 497 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 ZMYM5Q9UJ78 669 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 AGAP1Q9UPQ3 857 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 NUMBLQ9Y6R0 609 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 C2orf16Q68DN1 1984 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
CHD7-208ENST00000528280 ACACBO00763 2458 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 PDCD11Q14690 1871 aaKnown RBP10.34□□□□□ -0.75
CHD7-208ENST00000528280 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 GOLGA8IPA6NC78 632 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 GOLGA8JA6NMD2 632 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 SPTLC1O15269 473 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 ITGB3P05106 788 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 AFMP43652 599 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 LHX1P48742 406 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 AP3M2P53677 418 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 EPHA5P54756 1037 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 NUCB2P80303 420 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 MYL7Q01449 175 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 TSPY1Q01534 308 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 DUSP4Q13115 394 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 PKP1Q13835 747 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 VEPH1Q14D04 833 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 NFE2Q16621 373 aaPredicted RBP10.34□□□□□ -0.75
CHD7-208ENST00000528280 KNOP1Q1ED39 458 aaKnown RBP10.34□□□□□ -0.75
CHD7-208ENST00000528280 WDR49Q8IV35 697 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 NPAS3Q8IXF0 933 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 C12orf56Q8IXR9 622 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 EFCAB13Q8IY85 973 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 SIX5Q8N196 739 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 XXYLT1Q8NBI6 393 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 ITFG1Q8TB96 612 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 FEZF2Q8TBJ5 459 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 NOC3LQ8WTT2 800 aaKnown RBP10.34□□□□□ -0.75
CHD7-208ENST00000528280 TMEM174Q8WUU8 243 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 NKD2Q969F2 451 aaPredicted RBP10.34□□□□□ -0.75
CHD7-208ENST00000528280 ELSPBP1Q96BH3 223 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 MCRS1Q96EZ8 462 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 BORCS6Q96GS4 357 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 PAGE5Q96GU1 130 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 FNBP1Q96RU3 617 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 NELL2Q99435 816 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 ACBD6Q9BR61 282 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 ANP32EQ9BTT0 268 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 ZCWPW1Q9H0M4 648 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 ZFP14Q9HCL3 533 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 PDE11AQ9HCR9 933 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 INTS13Q9NVM9 706 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 HCFC1R1Q9NWW0 138 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 HSPBP1Q9NZL4 362 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 SERTAD1Q9UHV2 236 aa10.34□□□□□ -0.75
CHD7-208ENST00000528280 EP300Q09472 2414 aaPredicted RBP10.34□□□□□ -0.75
CHD7-208ENST00000528280 A0A1W2PQ27 194 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 A0A1W2PQ64 194 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 A0A1W2PQD8 194 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PPEF2O14830 753 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 CFHP08603 1231 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 KRT19P08727 400 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 AOC1P19801 751 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PCSK1P29120 753 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 POLR2BP30876 1174 aaKnown RBP10.33□□□□□ -0.76
CHD7-208ENST00000528280 SYKP43405 635 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PRKCQQ04759 706 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 EHHADHQ08426 723 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 CUL4BQ13620 913 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 TAF12Q16514 161 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 SNRNP35Q16560 246 aaKnown RBP10.33□□□□□ -0.76
CHD7-208ENST00000528280 BMT2Q1RMZ1 405 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PARM1Q6UWI2 310 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 DGLUCYQ7Z3D6 616 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 DNAJB7Q7Z6W7 309 aaPredicted RBP10.33□□□□□ -0.76
CHD7-208ENST00000528280 TOP6BLQ8N6T0 577 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 C1orf127Q8N9H9 656 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 FLCNQ8NFG4 579 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 SCFD1Q8WVM8 642 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 FGF14Q92915 247 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PGLYRP2Q96PD5 576 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 BLZF1Q9H2G9 400 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 IKZF4Q9H2S9 585 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 SLC39A2Q9NP94 309 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 AGPAT3Q9NRZ7 376 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 EXOC1Q9NV70 894 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 CEP72Q9P209 647 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 PCDHB5Q9Y5E4 795 aa10.33□□□□□ -0.76
CHD7-208ENST00000528280 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 A0A1B0GVL5 298 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 MTMR11A4FU01 709 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 GOLGA6L4A6NEF3 574 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 TGFB1I1O43294 461 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
CHD7-208ENST00000528280 MYL4P12829 197 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 PFKFB1P16118 471 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 TNNI1P19237 187 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 HOXD13P35453 343 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 STARD6P59095 220 aa10.32□□□□□ -0.76
CHD7-208ENST00000528280 GPC5P78333 572 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms