RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RHPN2Q8IUC4 686 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 RCOR2Q8IZ40 523 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 CEP120Q8N960 986 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 STMN4Q9H169 189 aaPredicted RBP18.61■□□□□ 0.57
USH1C-205ENST00000527020 IVNS1ABPQ9Y6Y0 642 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 DNAJC25-GNG10A0A024R161 153 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 SURF1Q15526 300 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 Q3C1V9 767 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 EEF1DP3Q658K8 133 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 CCDC62Q6P9F0 684 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 ARMC9Q7Z3E5 817 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 GLIS1Q8NBF1 620 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 TMEM35BQ8NCS4 154 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 IPO4Q8TEX9 1081 aaKnown RBP18.61■□□□□ 0.57
USH1C-205ENST00000527020 COPS5Q92905 334 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 SERPINB12Q96P63 405 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 C2orf40Q9H1Z8 148 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 FZD8Q9H461 694 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 CCDC134Q9H6E4 229 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 PCDHGC3Q9UN70 934 aa18.61■□□□□ 0.57
USH1C-205ENST00000527020 ZSWIM8A7E2V4 1837 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 LIASO43766 372 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 DDNO94850 711 aaPredicted RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 CNGA2Q16280 664 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 SPRED3Q2MJR0 410 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 RNF187Q5TA31 235 aaPredicted RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 IZUMO3Q5VZ72 239 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 DNAJC24Q6P3W2 148 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 ZNF365Q70YC5 407 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 CPLX4Q7Z7G2 160 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 CDR2LQ86X02 465 aaPredicted RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 FBXO16Q8IX29 292 aaPredicted RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 THNSL1Q8IYQ7 743 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 CCDC89Q8N998 374 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 OSBPL7Q9BZF2 842 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 INTS9Q9NV88 658 aaKnown RBP18.6■□□□□ 0.57
USH1C-205ENST00000527020 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 CTNNAL1Q9UBT7 734 aa18.6■□□□□ 0.57
USH1C-205ENST00000527020 ACKR2O00590 384 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 CREB1P16220 341 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 OSTNP61366 133 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 TRPC3Q13507 836 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 ZNF699Q32M78 642 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 CYP4A22Q5TCH4 519 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 ATF7IP2Q5U623 682 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 LRRC38Q5VT99 294 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 KAZNQ674X7 775 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 HIBCHQ6NVY1 386 aaPredicted RBP18.59■□□□□ 0.57
USH1C-205ENST00000527020 TMEM192Q8IY95 271 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 CACNA2D3Q8IZS8 1091 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 TMEM130Q8N3G9 435 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 RBM41Q96IZ5 413 aaKnown RBP18.59■□□□□ 0.57
USH1C-205ENST00000527020 PRMT1Q99873 361 aaKnown RBP18.59■□□□□ 0.57
USH1C-205ENST00000527020 ZNF518BQ9C0D4 1074 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 MINDY3Q9H8M7 445 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 DNPEPQ9ULA0 475 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 POLIQ9UNA4 740 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 B4GALT4O60513 344 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 SLC25A27O95847 323 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 KRT1P04264 644 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 GKAP1Q5VSY0 366 aaPredicted RBP18.59■□□□□ 0.57
USH1C-205ENST00000527020 DENND1BQ6P3S1 775 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 KCNV1Q6PIU1 500 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 SPOCD1Q6ZMY3 1216 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 RELL1Q8IUW5 271 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 SPATA33Q96N06 139 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 FHDC1Q9C0D6 1143 aaPredicted RBP18.59■□□□□ 0.57
USH1C-205ENST00000527020 CAPN7Q9Y6W3 813 aa18.59■□□□□ 0.57
USH1C-205ENST00000527020 FOXO6A8MYZ6 492 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 TCEA3O75764 348 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 IQCF3P0C7M6 154 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 EIF4BP23588 611 aaKnown RBP18.58■□□□□ 0.57
USH1C-205ENST00000527020 MOGSQ13724 837 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 DRICH1Q6PGQ1 229 aaPredicted RBP18.58■□□□□ 0.57
USH1C-205ENST00000527020 MOB2Q70IA6 237 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 TAOK1Q7L7X3 1001 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 ACSF2Q96CM8 615 aaPredicted RBP18.58■□□□□ 0.57
USH1C-205ENST00000527020 CABS1Q96KC9 395 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 NLRP4Q96MN2 994 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 TJP2Q9UDY2 1190 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 CYTH4Q9UIA0 394 aa18.58■□□□□ 0.57
USH1C-205ENST00000527020 CETPP11597 493 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 ATF7P17544 494 aaPredicted RBP18.58■□□□□ 0.56
USH1C-205ENST00000527020 CLCN3P51790 818 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 MBTD1Q05BQ5 628 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 P3H1Q32P28 736 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 DCUN1D2Q6PH85 259 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 VSTM1Q6UX27 236 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 ERICH1Q86X53 443 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.56
USH1C-205ENST00000527020 EXOC8Q8IYI6 725 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 LRRC34Q8IZ02 419 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 NIPA2Q8N8Q9 360 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 BBOF1Q8ND07 529 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 ARHGEF2Q92974 986 aaKnown RBP18.58■□□□□ 0.56
USH1C-205ENST00000527020 CDT1Q9H211 546 aa18.58■□□□□ 0.56
USH1C-205ENST00000527020 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.56
USH1C-205ENST00000527020 SIX4Q9UIU6 781 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms