RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 MYO10Q9HD67 2058 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 PSMA7O14818 248 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 IKBKBO14920 756 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 CCL16O15467 120 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 KRT13P13646 458 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 HOXA9P31269 272 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 PPP1R2P41236 205 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 PMS1P54277 932 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 BIRC3Q13489 604 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 TDRD10Q5VZ19 366 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 INTS8Q75QN2 995 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 TMEM86AQ8N2M4 240 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 TOP6BLQ8N6T0 577 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 OR10T2Q8NGX3 314 aa17.43■□□□□ 0.38
SSSCA1-202ENST00000526433 TRIM49BA6NDI0 452 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 XYLBO75191 536 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 VNN2O95498 520 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 SP100P23497 879 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 MYL6P60660 151 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 FKBP3Q00688 224 aaKnown RBP17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 LRRC63Q05C16 580 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 SOWAHAQ2M3V2 549 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 KLHL10Q6JEL2 608 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 SV2AQ7L0J3 742 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 DPH6Q7L8W6 267 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 PGLYRP2Q96PD5 576 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 MKNK1Q9BUB5 465 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 ZCWPW1Q9H0M4 648 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 POLIQ9UNA4 740 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 NR2E1Q9Y466 385 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 TSC2P49815 1807 aa17.42■□□□□ 0.38
SSSCA1-202ENST00000526433 STAU1O95793 577 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 ATICP31939 592 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 MCCD1P59942 119 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 ENPEPQ07075 957 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 DUSP4Q13115 394 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 NCOA4Q13772 614 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 WDR72Q3MJ13 1102 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 ZACNQ401N2 412 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 LIMS2Q7Z4I7 341 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 GRASPQ7Z6J2 395 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 ZC3H3Q8IXZ2 948 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 TRIML1Q8N9V2 468 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 ATAD1Q8NBU5 361 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 SYAP1Q96A49 352 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 MMS19Q96T76 1030 aa17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 DDX43Q9NXZ2 648 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-202ENST00000526433 C2CD4DB7Z1M9 353 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 GOLGA6L22H0YM25 854 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 GABRDO14764 452 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 VNN1O95497 513 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 LRG1P02750 347 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 POU2F2P09086 479 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 TRIM49P0CI25 452 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 TRIM49CP0CI26 452 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 EPB41P11171 864 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 LHX1P48742 406 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 NTHL1P78549 312 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 MYL7Q01449 175 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 SLC39A12Q504Y0 691 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 RNF135Q8IUD6 432 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 DCP1BQ8IZD4 617 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 ADGRF2Q8IZF7 708 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 ACBD6Q9BR61 282 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 XYLT2Q9H1B5 865 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 USTQ9Y2C2 406 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 SLC27A5Q9Y2P5 690 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 INSL5Q9Y5Q6 135 aa17.4■□□□□ 0.38
SSSCA1-202ENST00000526433 NOTCH4Q99466 2003 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 MTMR11A4FU01 709 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 PTPN2P17706 415 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 GCLMP48507 274 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 CDR1P51861 262 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 TNNC1P63316 161 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 TSPY1Q01534 308 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 PPP3CAQ08209 521 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 SGSM1Q2NKQ1 1148 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 OTOP3Q7RTS5 596 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 KBTBD7Q8WVZ9 684 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 KHSRPQ92945 711 aaKnown RBP eCLIP17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 DUSP9Q99956 384 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 CRISPLD1Q9H336 500 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 VRTNQ9H8Y1 702 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 HCFC1R1Q9NWW0 138 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 DNMT3BQ9UBC3 853 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 NXF1Q9UBU9 619 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 CLUHO75153 1309 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 DENND4AQ7Z401 1863 aa17.39■□□□□ 0.37
SSSCA1-202ENST00000526433 BICDL2A1A5D9 508 aa17.38■□□□□ 0.37
SSSCA1-202ENST00000526433 SLC16A3O15427 465 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms