RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.61■□□□□ 0.57
CCS-204ENST00000526066 ARL5CA6NH57 179 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 AFF1P51825 1210 aaKnown RBP18.6■□□□□ 0.57
CCS-204ENST00000526066 WNT7BP56706 349 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 GET4Q7L5D6 327 aaPredicted RBP18.6■□□□□ 0.57
CCS-204ENST00000526066 PALB2Q86YC2 1186 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 WDR49Q8IV35 697 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 COLGALT2Q8IYK4 626 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 SLC44A3Q8N4M1 653 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 FNBP1Q96RU3 617 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 GAD1Q99259 594 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 MARCH5Q9NX47 278 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 ZDHHC7Q9NXF8 308 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 LIMA1Q9UHB6 759 aaKnown RBP18.6■□□□□ 0.57
CCS-204ENST00000526066 C2CD2Q9Y426 696 aa18.6■□□□□ 0.57
CCS-204ENST00000526066 LRRC10BA6NIK2 292 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 STX10O60499 249 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
CCS-204ENST00000526066 RFPL2O75678 378 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 C1RP00736 705 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 SPATA31D3P0C874 917 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 CDK11BP21127 795 aaKnown RBP18.59■□□□□ 0.57
CCS-204ENST00000526066 GTF2H1P32780 548 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
CCS-204ENST00000526066 AP3M2P53677 418 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 DSG1Q02413 1049 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 ZBTB6Q15916 424 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 MAN2A1Q16706 1144 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 C1orf220Q5T0J3 134 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 SPATA31D4Q6ZUB0 917 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 GSTCDQ8NEC7 633 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 SLC35C1Q96A29 364 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 CCDC127Q96BQ5 260 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 CGRRF1Q99675 332 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 RXFP1Q9HBX9 757 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 ARHGEF3Q9NR81 526 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 KLK14Q9P0G3 267 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 SIT1Q9Y3P8 196 aa18.59■□□□□ 0.57
CCS-204ENST00000526066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCS-204ENST00000526066 SMIM28A0A1B0GU29 152 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 KRBA1A5PL33 1030 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 LRRIQ3A6PVS8 624 aaPredicted RBP18.58■□□□□ 0.56
CCS-204ENST00000526066 PTGESO14684 152 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 DLATP10515 647 aaKnown RBP18.58■□□□□ 0.56
CCS-204ENST00000526066 PRKCSHP14314 528 aaPredicted RBP18.58■□□□□ 0.56
CCS-204ENST00000526066 SCNN1GP51170 649 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 KIAA0319Q5VV43 1072 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 JADE1Q6IE81 842 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 TAS1R1Q7RTX1 841 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 GPR152Q8TDT2 470 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 RIN2Q8WYP3 895 aaPredicted RBP18.58■□□□□ 0.56
CCS-204ENST00000526066 FAM212AQ96EL1 285 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 SHDQ96IW2 340 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 ZFP42Q96MM3 310 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 MYADMQ96S97 322 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 TUBGCP2Q9BSJ2 902 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 R4GN57 208 aa18.58■□□□□ 0.56
CCS-204ENST00000526066 MTCL1Q9Y4B5 1905 aaKnown RBP18.58■□□□□ 0.56
CCS-204ENST00000526066 XPOTO43592 962 aaKnown RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 LAMP2P13473 410 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 ATP1A3P13637 1013 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 DLG4P78352 724 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 DSC1Q08554 894 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 GRIK3Q13003 919 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 TMEM132DQ14C87 1099 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 KRT31Q15323 416 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 UVSSAQ2YD98 709 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 DCAF17Q5H9S7 520 aaPredicted RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 TCERG1LQ5VWI1 586 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 PHLDB3Q6NSJ2 640 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 FUT10Q6P4F1 479 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 DCLRE1AQ6PJP8 1040 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 APTXQ7Z2E3 356 aaKnown RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 CREBRFQ8IUR6 639 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 GLYCTKQ8IVS8 523 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 EFCAB13Q8IY85 973 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 KIF12Q96FN5 646 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 ZMAT2Q96NC0 199 aaKnown RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 PPP1R10Q96QC0 940 aaKnown RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 PRKD2Q9BZL6 878 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 SLC38A7Q9NVC3 462 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 INTS13Q9NVM9 706 aa18.57■□□□□ 0.56
CCS-204ENST00000526066 ZFP37Q9Y6Q3 630 aaPredicted RBP18.57■□□□□ 0.56
CCS-204ENST00000526066 CITO14578 2027 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 PMM2O15305 246 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 TGM5O43548 720 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 TADA2AO75478 443 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 THP07101 528 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 TPM2P07951 284 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 NFICP08651 508 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 TRIM49P0CI25 452 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 TRIM49CP0CI26 452 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 TNNI1P19237 187 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 CYP3A5P20815 502 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 COPB1P53618 953 aaKnown RBP18.56■□□□□ 0.56
CCS-204ENST00000526066 DUOXA2Q1HG44 320 aa18.56■□□□□ 0.56
CCS-204ENST00000526066 LIN9Q5TKA1 542 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms