RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 DNAJC25Q9H1X3 360 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 CYP3A43Q9HB55 503 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 CLDND1Q9NY35 253 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 L1RE1Q9UN81 338 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 CDY1Q9Y6F8 540 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 PDCD11Q14690 1871 aaKnown RBP13.27□□□□□ -0.29
CCS-202ENST00000525435 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 SYCE3A1L190 88 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 ATF2P15336 505 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 GTF2F1P35269 517 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCS-202ENST00000525435 GNL1P36915 607 aaPredicted RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 ZNF165P49910 485 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 MYL7Q01449 175 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 PUS10Q3MIT2 529 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 ZSCAN23Q3MJ62 389 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 ANO6Q4KMQ2 910 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 CBWD6Q4V339 395 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 CBWD3Q5JTY5 395 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 CBWD5Q5RIA9 395 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 ANKRD54Q6NXT1 300 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 RSPO2Q6UXX9 243 aaPredicted RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 C11orf57Q6ZUT1 292 aaPredicted RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 PALB2Q86YC2 1186 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 TCEAL8Q8IYN2 117 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 DCP1BQ8IZD4 617 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 C2orf15Q8WU43 125 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 DNAI2Q9GZS0 605 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 UBE2ZQ9H832 354 aaPredicted RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
CCS-202ENST00000525435 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
CCS-202ENST00000525435 PRUNE2Q8WUY3 3088 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 ADAM12O43184 909 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 GLP2RO95838 553 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 POU2F2P09086 479 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 EPCAMP16422 314 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 HOXA9P31269 272 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 ELF1P32519 619 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 MTIF2P46199 727 aaKnown RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 TSPY1Q01534 308 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 ROR1Q01973 937 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 ITIH3Q06033 890 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 MAPRE1Q15691 268 aaKnown RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 NFE2Q16621 373 aaPredicted RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 MAN2A1Q16706 1144 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 LEXMQ3ZCV2 418 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 TCP11X2Q5H9J9 407 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 CDKAL1Q5VV42 579 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 CCDC149Q6ZUS6 474 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 CREBRFQ8IUR6 639 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 KREMEN2Q8NCW0 462 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 CMASQ8NFW8 434 aaPredicted RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 ATXN2LQ8WWM7 1075 aaKnown RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 MSLNLQ96KJ4 702 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 RTP3Q9BQQ7 232 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 TUBGCP2Q9BSJ2 902 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 NIF3L1Q9GZT8 377 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 MMRN2Q9H8L6 949 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 SAMSN1Q9NSI8 373 aaKnown RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 FANCLQ9NW38 375 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 ZDHHC7Q9NXF8 308 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
CCS-202ENST00000525435 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 CDH9Q9ULB4 789 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 SCN1AP35498 2009 aa13.25□□□□□ -0.29
CCS-202ENST00000525435 WDR27A2RRH5 827 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 LINC01565O15544 149 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCS-202ENST00000525435 KCNJ12Q14500 433 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 NCAPHQ15003 741 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 ANKRD20A12PQ8NF67 263 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 SFXN1Q9H9B4 322 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 CD207Q9UJ71 328 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 FAM50BQ9Y247 325 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
CCS-202ENST00000525435 COL4A4P53420 1690 aaPredicted RBP13.24□□□□□ -0.29
CCS-202ENST00000525435 TBX10O75333 385 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 ZMYND10O75800 440 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 TPM2P07951 284 aa13.23□□□□□ -0.29
CCS-202ENST00000525435 CPB1P15086 417 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms