RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 A0A0B4J269 797 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 CCDC151A5D8V7 595 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ADM5C9JUS6 153 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 E7ENX8 843 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ORC4O43929 436 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 DTNBO60941 627 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 C1QL1O75973 258 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ARIH2O95376 493 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 FTLP02792 175 aaPredicted RBP3.05□□□□□ -1.92
CD44-216ENST00000525293 POU2F2P09086 479 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ELFN1P0C7U0 828 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 PRDX5P30044 214 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 GRIA3P42263 894 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 PIK3CGP48736 1102 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 FXR1P51114 621 aaKnown RBP eCLIP3.05□□□□□ -1.92
CD44-216ENST00000525293 HK3P52790 923 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 TAP2Q03519 686 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 NOGQ13253 232 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 TUBB3Q13509 450 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 HABP2Q14520 560 aaPredicted RBP3.05□□□□□ -1.92
CD44-216ENST00000525293 PTPRRQ15256 657 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 PTPROQ16827 1216 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 NBPF8Q3BBV2 869 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 COLEC12Q5KU26 742 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 THEMIS2Q5TEJ8 643 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 USP45Q70EL2 814 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 HEATR3Q7Z4Q2 680 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 CATIPQ7Z7H3 387 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ZBTB46Q86UZ6 589 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 FAM90A1Q86YD7 464 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 PRR18Q8N4B5 295 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 SH2D3CQ8N5H7 860 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 TNPO1Q92973 898 aaKnown RBP3.05□□□□□ -1.92
CD44-216ENST00000525293 RGMAQ96B86 450 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 HSPBAP1Q96EW2 488 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 SMOC2Q9H3U7 446 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 GPR35Q9HC97 309 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 CPNE5Q9HCH3 593 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 RLIMQ9NVW2 624 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ETAA1Q9NY74 926 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 CFAP97Q9P2B7 532 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ST3GAL5Q9UNP4 418 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.05□□□□□ -1.92
CD44-216ENST00000525293 NR2E3Q9Y5X4 410 aa3.05□□□□□ -1.92
CD44-216ENST00000525293 SPATA31A3Q5VYP0 1347 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 VWC2LB2RUY7 222 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 SLC16A6O15403 523 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 TRIAP1O43715 76 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 KIF20AO95235 890 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 FTH1P19P0C7X4 201 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 RARBP10826 455 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 CHRM3P20309 590 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 MAP2K6P52564 334 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 NXPH1P58417 271 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 ANAPC15P60006 121 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 ITIH3Q06033 890 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 KIF22Q14807 665 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 TXNRD1Q16881 649 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 CCDC157Q569K6 752 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 TSTD2Q5T7W7 516 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 TAF2Q6P1X5 1199 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 GRASPQ7Z6J2 395 aaPredicted RBP3.04□□□□□ -1.92
CD44-216ENST00000525293 CPA6Q8N4T0 437 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 PSD4Q8NDX1 1056 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 GPATCH3Q96I76 525 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 UROC1Q96N76 676 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 CNPPD1Q9BV87 410 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 GTPBP4Q9BZE4 634 aaKnown RBP3.04□□□□□ -1.92
CD44-216ENST00000525293 TPSD1Q9BZJ3 242 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 AMBRA1Q9C0C7 1298 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 MRPL46Q9H2W6 279 aaKnown RBP3.04□□□□□ -1.92
CD44-216ENST00000525293 WDCPQ9H6R7 721 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 LMBRD1Q9NUN5 540 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 FEZ2Q9UHY8 353 aaPredicted RBP3.04□□□□□ -1.92
CD44-216ENST00000525293 PCDHA1Q9Y5I3 950 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 TNFRSF18Q9Y5U5 241 aa3.04□□□□□ -1.92
CD44-216ENST00000525293 KAT6AQ92794 2004 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 ADGRA2Q96PE1 1338 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 WDR27A2RRH5 827 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 LINC00473A8K010 186 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 H3BUI4 141 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 CHEK2O96017 543 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 AHSGP02765 367 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 RHOP08100 348 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 TYRP14679 529 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 IBSPP21815 317 aaPredicted RBP3.03□□□□□ -1.92
CD44-216ENST00000525293 NDUFV1P49821 464 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 NHLH1Q02575 133 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 PGS1Q32NB8 556 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 TMEM240Q5SV17 173 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 ZKSCAN2Q63HK3 967 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 USP37Q86T82 979 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 PPP1R3BQ86XI6 285 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 CHMP4CQ96CF2 233 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 TIMP4Q99727 224 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 ACTRT3Q9BYD9 372 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 TINAGL1Q9GZM7 467 aaPredicted RBP3.03□□□□□ -1.92
CD44-216ENST00000525293 KMT5AQ9NQR1 393 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 AASDHPPTQ9NRN7 309 aa3.03□□□□□ -1.92
CD44-216ENST00000525293 KLC4Q9NSK0 619 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms