RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 PUM1Q14671 1186 aaKnown RBP eCLIP12.35□□□□□ -0.43
CTTN-209ENST00000525276 SNRNP35Q16560 246 aaKnown RBP12.35□□□□□ -0.43
CTTN-209ENST00000525276 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
CTTN-209ENST00000525276 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 DSTYKQ6XUX3 929 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 PALB2Q86YC2 1186 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 GLYCTKQ8IVS8 523 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 PJA1Q8NG27 643 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
CTTN-209ENST00000525276 RUBCNQ92622 972 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 CNTNAP3BQ96NU0 1288 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 CLSTN3Q9BQT9 956 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 CNTNAP3Q9BZ76 1288 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 KCTD10Q9H3F6 313 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 SIT1Q9Y3P8 196 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 NUMBLQ9Y6R0 609 aa12.35□□□□□ -0.43
CTTN-209ENST00000525276 ARHGEF37A1IGU5 675 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 M0QZQ0 153 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 STK25O00506 426 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 PIRO00625 290 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 PDXKO00764 312 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 PPEF2O14830 753 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 TGM5O43548 720 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 EXOC3O60645 756 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 TMEM191BP0C7N4 346 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 OR1D2P34982 312 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 STARD6P59095 220 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 LILRA4P59901 499 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 UBE2HP62256 183 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 RAB33AQ14088 237 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 ZNF280DQ6N043 979 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
CTTN-209ENST00000525276 GUF1Q8N442 669 aaKnown RBP12.34□□□□□ -0.43
CTTN-209ENST00000525276 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 FGF14Q92915 247 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 SMARCE1Q969G3 411 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 ZNF560Q96MR9 790 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 IPO9Q96P70 1041 aaKnown RBP12.34□□□□□ -0.43
CTTN-209ENST00000525276 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
CTTN-209ENST00000525276 PLEKHA4Q9H4M7 779 aa12.34□□□□□ -0.43
CTTN-209ENST00000525276 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
CTTN-209ENST00000525276 SHISA7A6NL88 538 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 ADAM12O43184 909 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 PRPF40AO75400 957 aaKnown RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 TNNC2P02585 160 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 NR3C1P04150 777 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 ODC1P11926 461 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 PNPLA4P41247 253 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 TAF6P49848 677 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 YWHAHQ04917 246 aaPredicted RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 MRPL58Q14197 206 aaKnown RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 PSMD6Q15008 389 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 RSPO4Q2I0M5 234 aaPredicted RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 SV2CQ496J9 727 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 LIN9Q5TKA1 542 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 RSPO2Q6UXX9 243 aaPredicted RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 USP37Q86T82 979 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 WDR49Q8IV35 697 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 C1orf127Q8N9H9 656 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 TMEM174Q8WUU8 243 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 ANKRD36BP1Q96IX9 119 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 SENP8Q96LD8 212 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 DMAC2Q9NW81 257 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 ITGA11Q9UKX5 1188 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 MAPK8IP1Q9UQF2 711 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
CTTN-209ENST00000525276 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 CDY1Q9Y6F8 540 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 F5P12259 2224 aa12.33□□□□□ -0.44
CTTN-209ENST00000525276 CEP295Q9C0D2 2601 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 ANK1P16157 1881 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 SPTLC1O15269 473 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 TBC1D4O60343 1298 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 OAZ2O95190 189 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 ITGB3P05106 788 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 DLATP10515 647 aaKnown RBP12.32□□□□□ -0.44
CTTN-209ENST00000525276 TYMPP19971 482 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 TGM1P22735 817 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
CTTN-209ENST00000525276 GPC5P78333 572 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 NTHL1P78549 312 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 RBP5P82980 135 aa12.32□□□□□ -0.44
CTTN-209ENST00000525276 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms