RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
SF3B2-204ENST00000525207 HSFX1Q9UBD0 423 aa10.2□□□□□ -0.78
SF3B2-204ENST00000525207 UBE4BO95155 1302 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 KANSL1LA0AUZ9 987 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 KPNA7A9QM74 516 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 STK25O00506 426 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 CYB561D2O14569 222 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 KIAA0391O15091 583 aaKnown RBP10.19□□□□□ -0.78
SF3B2-204ENST00000525207 EXTL3O43909 919 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 GFRA3O60609 400 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 SOAT2O75908 522 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 ITGB3P05106 788 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 DCNP07585 359 aaKnown RBP10.19□□□□□ -0.78
SF3B2-204ENST00000525207 MYL4P12829 197 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 GLULP15104 373 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 GJA1P17302 382 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 PNPLA4P41247 253 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 EPHB3P54753 998 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 TFAMQ00059 246 aaKnown RBP10.19□□□□□ -0.78
SF3B2-204ENST00000525207 EHHADHQ08426 723 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 SNW1Q13573 536 aaKnown RBP10.19□□□□□ -0.78
SF3B2-204ENST00000525207 TEAD2Q15562 447 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 SLC39A12Q504Y0 691 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 FAM26FQ5R3K3 315 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 WSCD1Q658N2 575 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 TANGO2Q6ICL3 276 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 VITQ6UXI7 678 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 TPRG1Q6ZUI0 275 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 GPD1LQ8N335 351 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 LRRC52Q8N7C0 313 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 IQUBQ8NA54 791 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 CXorf38Q8TB03 319 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 ZSCAN18Q8TBC5 510 aaPredicted RBP10.19□□□□□ -0.78
SF3B2-204ENST00000525207 DNASE1L2Q92874 299 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 SMARCD2Q92925 531 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 PSMG2Q969U7 264 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 BORCS6Q96GS4 357 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 FAM84AQ96KN4 292 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 PLA2G2FQ9BZM2 168 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 MTMR12Q9C0I1 747 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 LRRC27Q9C0I9 530 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 TRPV4Q9HBA0 871 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 ZFP14Q9HCL3 533 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 LTB4R2Q9NPC1 389 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 ITGA11Q9UKX5 1188 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 SIT1Q9Y3P8 196 aa10.19□□□□□ -0.78
SF3B2-204ENST00000525207 RIF1Q5UIP0 2472 aaKnown RBP10.19□□□□□ -0.78
SF3B2-204ENST00000525207 GVINP1Q7Z2Y8 2422 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 VPS13AQ96RL7 3174 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 PTPRJQ12913 1337 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 HELZP42694 1942 aaKnown RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 A0A1W2PRU2 124 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 GOLGA8IPA6NC78 632 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 PRR23AA6NEV1 266 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 GOLGA8JA6NMD2 632 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 TMEM191BP0C7N4 346 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ATF6P18850 670 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 HOXD13P35453 343 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ALDH1A3P47895 512 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 AMPD3Q01432 767 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 SMARCB1Q12824 385 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 GRM2Q14416 872 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 FOXD4L6Q3SYB3 417 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 SLC44A4Q53GD3 710 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 STXBP5Q5T5C0 1151 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 RESP18Q5W5W9 173 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ATL3Q6DD88 541 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 FOXD4L3Q6VB84 417 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 GAREM2Q75VX8 874 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 EPM2AIP1Q7L775 607 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 C2orf15Q8WU43 125 aaKnown RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ZSWIM3Q96MP5 696 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 SEPT5Q99719 369 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 LPIN3Q9BQK8 851 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 MKNK1Q9BUB5 465 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 PCIF1Q9H4Z3 704 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 SLITRK6Q9H5Y7 841 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 PDE11AQ9HCR9 933 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 HEBP1Q9NRV9 189 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 SIX4Q9UIU6 781 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 L1RE1Q9UN81 338 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ASB3Q9Y575 518 aa10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ZFHX2Q9C0A1 2572 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-204ENST00000525207 ZNF638Q14966 1978 aaKnown RBP10.17□□□□□ -0.78
SF3B2-204ENST00000525207 GREB1Q4ZG55 1949 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 POLR2DO15514 142 aaKnown RBP10.17□□□□□ -0.78
SF3B2-204ENST00000525207 LRRN2O75325 713 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 PSMC3P17980 439 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
SF3B2-204ENST00000525207 ME1P48163 572 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 DNM1Q05193 864 aaKnown RBP10.17□□□□□ -0.78
SF3B2-204ENST00000525207 BFSP1Q12934 665 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 UBXN2BQ14CS0 331 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 VEPH1Q14D04 833 aa10.17□□□□□ -0.78
SF3B2-204ENST00000525207 MGAT5BQ3V5L5 792 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms