RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CLDN10P78369 228 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ADCY1Q08828 1119 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 MRPL58Q14197 206 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TAF12Q16514 161 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 NFE2Q16621 373 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 SGSM1Q2NKQ1 1148 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 WDR72Q3MJ13 1102 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZACNQ401N2 412 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 WDR44Q5JSH3 913 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TDRD10Q5VZ19 366 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 KRT39Q6A163 491 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 IQCEQ6IPM2 695 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 LILRA6Q6PI73 481 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 SYCE2Q6PIF2 218 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 C4orf50Q6ZRC1 276 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 FRMD5Q7Z6J6 570 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 GPR149Q86SP6 731 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ADHFE1Q8IWW8 467 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 PDCL2Q8N4E4 241 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 C12orf76Q8N812 135 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 TDRD5Q8NAT2 981 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 SPPL2BQ8TCT7 592 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ACSF2Q96CM8 615 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 EEF2KMTQ96G04 330 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 PGLYRP2Q96PD5 576 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 PHF7Q9BWX1 381 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 RHOBTB2Q9BYZ6 727 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 PRKD2Q9BZL6 878 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 DDX43Q9NXZ2 648 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 ABI2Q9NYB9 513 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 SIX4Q9UIU6 781 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 RWDD2AQ9UIY3 292 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 PRRC2BQ5JSZ5 2229 aaKnown RBP5.79□□□□□ -1.48
HMGB1P40-201ENST00000525121 CLUHO75153 1309 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TCHHQ07283 1943 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 A8MXQ7 604 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 PPP1R3GB7ZBB8 358 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CITO14578 2027 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CCL16O15467 120 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ADAM12O43184 909 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TBC1D4O60343 1298 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 RFPL2O75678 378 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ABLIM3O94929 683 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 FGF19O95750 216 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 HLA-DRAP01903 254 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 C4BPAP04003 597 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 POU2F2P09086 479 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 FAM163BP0C2L3 166 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 OR4Q2P0C623 313 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 BMP1P13497 986 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CD44P16070 742 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 WARSP23381 471 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 FSHRP23945 695 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 IGFBP6P24592 240 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ERCC5P28715 1186 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 GBP2P32456 591 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 PMS1P54277 932 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 NLRP12P59046 1061 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 YWHAEP62258 255 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 NOP14P78316 857 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 DLG4P78352 724 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 GPR17Q13304 367 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 STX1AQ16623 288 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SOWAHAQ2M3V2 549 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 MGAT5BQ3V5L5 792 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 PABPC1LQ4VXU2 614 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SLC39A12Q504Y0 691 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CT47A1Q5JQC4 288 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 INTS6LQ5JSJ4 861 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CYP4A22Q5TCH4 519 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TTI2Q6NXR4 508 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SCARA5Q6ZMJ2 495 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 RNF19BQ6ZMZ0 732 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SV2AQ7L0J3 742 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 OTOP3Q7RTS5 596 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 FILIP1Q7Z7B0 1213 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ITIH5Q86UX2 942 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 CREBRFQ8IUR6 639 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SPATA2LQ8IUW3 424 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZC3H3Q8IXZ2 948 aaKnown RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TCEAL8Q8IYN2 117 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 PLCD3Q8N3E9 789 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TMEM130Q8N3G9 435 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TTC39CQ8N584 583 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 LEMD2Q8NC56 503 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 FBXL13Q8NEE6 735 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ANKRD20A12PQ8NF67 263 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 OR6B3Q8NGW1 331 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 OR10T2Q8NGX3 314 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 GPT2Q8TD30 523 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SUSD6Q92537 303 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZNF516Q92618 1163 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 FAM84AQ96KN4 292 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 RPGRIP1Q96KN7 1286 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 TNIP3Q96KP6 325 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 ZNF512Q96ME7 567 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 GCNAQ96QF7 691 aa5.78□□□□□ -1.48
HMGB1P40-201ENST00000525121 SEPT5Q99719 369 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms