RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MAPK13O15264 365 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 CCL16O15467 120 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 LETM1O95202 739 aaPredicted RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 VNN2O95498 520 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 PTMSP20962 102 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 CDK11BP21127 795 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 LTBRP36941 435 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 PNPLA4P41247 253 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ASPAP45381 313 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 KCNQ1P51787 676 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 NDST1P52848 882 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 NOP14P78316 857 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 NTHL1P78549 312 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 POU5F1Q01860 360 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ROR1Q01973 937 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 MYL5Q02045 173 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ADCY1Q08828 1119 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ELAVL2Q12926 359 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ADAM15Q13444 863 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 MRPL58Q14197 206 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 IQCB1Q15051 598 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 KRT31Q15323 416 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 SGSM1Q2NKQ1 1148 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 TCP11X2Q5H9J9 407 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 MDH1BQ5I0G3 518 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 MIIPQ5JXC2 388 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 CDKAL1Q5VV42 579 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 KRT39Q6A163 491 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF280DQ6N043 979 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ANKS3Q6ZW76 656 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ACOT1Q86TX2 421 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 NT5DC4Q86YG4 428 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 KREMEN2Q8NCW0 462 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 FBXL13Q8NEE6 735 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 APPL2Q8NEU8 664 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC7A14Q8TBB6 771 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 GIPC2Q8TF65 315 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 TMEM174Q8WUU8 243 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 JAKMIP2Q96AA8 810 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 TWNKQ96RR1 684 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 TSPAN18Q96SJ8 248 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 TUBGCP2Q9BSJ2 902 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 INTS2Q9H0H0 1204 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 HSD3B7Q9H2F3 369 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 SNX25Q9H3E2 840 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 NDST4Q9H3R1 872 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 TSPY26PQ9H489 355 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 UBE2ZQ9H832 354 aaPredicted RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 CYP4F11Q9HBI6 524 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 RXFP1Q9HBX9 757 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 METTL14Q9HCE5 456 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 NGRNQ9NPE2 291 aaKnown RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 MAN1C1Q9NR34 630 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 FAM49BQ9NUQ9 324 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 HCFC1R1Q9NWW0 138 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 ABI2Q9NYB9 513 aaPredicted RBP4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 GTF3C4Q9UKN8 822 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 CCDC195A0A1B0GUA6 201 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 MTMR11A4FU01 709 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GRXCR2A6NFK2 248 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 BECN2A8MW95 431 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 H7C4K7 107 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 RNF225M0QZC1 329 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 NRG2O14511 850 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PRRG1O14668 218 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GABRDO14764 452 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 EPHB6O15197 1021 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 TEX33O43247 280 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 TBC1D4O60343 1298 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 STX10O60499 249 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 OAZ2O95190 189 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 FGFR1OPO95684 399 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GNA14O95837 355 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GLUD1P00367 558 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ASS1P00966 412 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 CYP11A1P05108 521 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ADH1AP07327 375 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 C8AP07357 584 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 CCDC130P13994 396 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 IL9P15248 144 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GJA1P17302 382 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 TYMPP19971 482 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 POU3F3P20264 500 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 WARSP23381 471 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 CYP2F1P24903 491 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ADORA2BP29275 332 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ATICP31939 592 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GTF2H1P32780 548 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GNL1P36915 607 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 USP8P40818 1118 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 COPB1P53618 953 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 AP3M2P53677 418 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 CACNA2D1P54289 1103 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 MARSP56192 900 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PLCB2Q00722 1185 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 CYP27A1Q02318 531 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 KCNMA1Q12791 1236 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 IFRD2Q12894 506 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 DUSP4Q13115 394 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 MTMR3Q13615 1198 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms