RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 DBR1Q9UK59 544 aaKnown RBP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 VAV3Q9UKW4 847 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 CA14Q9ULX7 337 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 NOTCH2Q04721 2471 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 TRBV23OR9-2A0A075B6M9 112 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 NPHP3-ACAD11A0A0J9YXS1 232 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 ENO4A6NNW6 628 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 OPA1O60313 960 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 TOP3BO95985 862 aaKnown RBP8.18□□□□□ -1.1
NEDD8-203ENST00000524927 ESR1P03372 595 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 PRKCQQ04759 706 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 IKZF1Q13422 519 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 PLCL1Q15111 1095 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 LPAL2Q16609 132 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 CT47A1Q5JQC4 288 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-203ENST00000524927 ZPBP2Q6X784 338 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 FGD2Q7Z6J4 655 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 MTDHQ86UE4 582 aaKnown RBP8.18□□□□□ -1.1
NEDD8-203ENST00000524927 LRRTM3Q86VH5 581 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 GSTCDQ8NEC7 633 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 KLHDC4Q8TBB5 520 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 PTCHD1Q96NR3 888 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 MYL10Q9BUA6 226 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 INTS7Q9NVH2 962 aaKnown RBP8.18□□□□□ -1.1
NEDD8-203ENST00000524927 RAI14Q9P0K7 980 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
NEDD8-203ENST00000524927 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 A0A087X0B3 334 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 NKRFO15226 690 aaKnown RBP eCLIP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 FGF10O15520 208 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 ALDH1L1O75891 902 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 DGKIO75912 1065 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 CCR10P46092 362 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 GUCY1A3Q02108 690 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 TEKQ02763 1124 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 KCNAB2Q13303 367 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 LAPTM5Q13571 262 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 TMEM179Q6ZVK1 233 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 ATG9AQ7Z3C6 839 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 CMTR2Q8IYT2 770 aaKnown RBP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 IFNL3Q8IZI9 196 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 TSPYL6Q8N831 410 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 LSM14AQ8ND56 463 aaKnown RBP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 MORC4Q8TE76 937 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 AFG1LQ8WV93 481 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 MISP3Q96FF7 219 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 LRIG1Q96JA1 1093 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 SLF1Q9BQI6 1058 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 OSBPL6Q9BZF3 934 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 BICC1Q9H694 974 aaKnown RBP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 BCAS3Q9H6U6 928 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 CAAP1Q9H8G2 361 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 PCDHA9Q9Y5H5 950 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 TNPO3Q9Y5L0 923 aaKnown RBP8.17□□□□□ -1.1
NEDD8-203ENST00000524927 RALGAPA1Q6GYQ0 2036 aa8.17□□□□□ -1.1
NEDD8-203ENST00000524927 MPHOSPH10O00566 681 aaKnown RBP8.16□□□□□ -1.1
NEDD8-203ENST00000524927 RASGRP1O95267 797 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 CRTAMO95727 393 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 ASLP04424 464 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 CD8BP10966 210 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 NAT1P18440 290 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 SOX5P35711 763 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 NEK4P51957 841 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 STARD6P59095 220 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 CALD1Q05682 793 aaKnown RBP8.16□□□□□ -1.1
NEDD8-203ENST00000524927 DCLRE1AQ6PJP8 1040 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-203ENST00000524927 SPOCD1Q6ZMY3 1216 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 THNSL2Q86YJ6 484 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 CPNE8Q86YQ8 564 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 SIAH1Q8IUQ4 282 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 UBR7Q8N806 425 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 C7orf31Q8N865 590 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 ZFYVE21Q9BQ24 234 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 TARS2Q9BW92 718 aaKnown RBP8.16□□□□□ -1.1
NEDD8-203ENST00000524927 PRMT8Q9NR22 394 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-203ENST00000524927 GPR27Q9NS67 375 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 MBNL3Q9NUK0 354 aaKnown RBP8.16□□□□□ -1.1
NEDD8-203ENST00000524927 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
NEDD8-203ENST00000524927 CREBBPQ92793 2442 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 ACACAQ13085 2346 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 CACNA1FO60840 1977 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 TMEM82A0PJX8 343 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 CAPN8A6NHC0 703 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 RNASE1P07998 156 aaKnown RBP8.15□□□□□ -1.1
NEDD8-203ENST00000524927 LCP1P13796 627 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 IGFALSP35858 605 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 FLT3P36888 993 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 OAZ1P54368 228 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 ERVFC1P60507 584 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 GPR85P60893 370 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 AMPD3Q01432 767 aa8.15□□□□□ -1.1
NEDD8-203ENST00000524927 CYP2R1Q6VVX0 501 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms