RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MRPS35P82673 323 aaKnown RBP2.38□□□□□ -2.03
CD44-212ENST00000524922 ARHGEF5Q12774 1597 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 TARDBPQ13148 414 aaKnown RBP eCLIP2.38□□□□□ -2.03
CD44-212ENST00000524922 SPDYE7PQ495Y7 208 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 CEP162Q5TB80 1403 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 SUPT6HQ7KZ85 1726 aaKnown RBP2.38□□□□□ -2.03
CD44-212ENST00000524922 ACTRT2Q8TDY3 377 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 ZNF384Q8TF68 577 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 SCARB1Q8WTV0 552 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 SARAFQ96BY9 339 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 PTCD3Q96EY7 689 aaKnown RBP2.38□□□□□ -2.03
CD44-212ENST00000524922 CYFIP2Q96F07 1278 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 ERBINQ96RT1 1412 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 DMRTA2Q96SC8 542 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 SPATA5L1Q9BVQ7 753 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 TLR10Q9BXR5 811 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 GSTO2Q9H4Y5 243 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 CAAP1Q9H8G2 361 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 IL17RBQ9NRM6 502 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 TBCCD1Q9NVR7 557 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 MAST1Q9Y2H9 1570 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 PCDHGA2Q9Y5H1 932 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 CDC42BPBQ9Y5S2 1711 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 NOX1Q9Y5S8 564 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 CEP350Q5VT06 3117 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 AOX1Q06278 1338 aa2.38□□□□□ -2.03
CD44-212ENST00000524922 PLEKHG1Q9ULL1 1385 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 NOS1P29475 1434 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 STRCP1A6NGW2 1772 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 TRIM75PA6NK02 468 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 GPR39O43194 453 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 BRINP1O60477 761 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 ENDOD1O94919 500 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 CDK4P11802 303 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 OSMP13725 252 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 ITGB6P18564 788 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 DDCP20711 480 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 HNRNPMP52272 730 aaKnown RBP eCLIP2.37□□□□□ -2.03
CD44-212ENST00000524922 MAPK10P53779 464 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 CTXN1P60606 82 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 SSBP2P81877 361 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 TFF2Q03403 129 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 SF3B3Q15393 1217 aaKnown RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 ARHGEF25Q86VW2 580 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 CBARPQ8N350 705 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 Q8N9P0 234 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 C9orf106Q8NAJ2 232 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 IFI44Q8TCB0 444 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 COG1Q8WTW3 980 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 LPIN2Q92539 896 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 DPF2Q92785 391 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 ZNF778Q96MU6 729 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 UROC1Q96N76 676 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 SLC2A13Q96QE2 648 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 MED15Q96RN5 788 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 SENP6Q9GZR1 1112 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 CASS4Q9NQ75 786 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 SLC52A1Q9NWF4 448 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 ASB6Q9NWX5 421 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 SLC17A6Q9P2U8 582 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 TUBD1Q9UJT1 453 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 TRPC5Q9UL62 973 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 RUVBL1Q9Y265 456 aaKnown RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 EID1Q9Y6B2 187 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 TTBK1Q5TCY1 1321 aaPredicted RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 MYBBP1AQ9BQG0 1328 aaKnown RBP2.37□□□□□ -2.03
CD44-212ENST00000524922 UBR1Q8IWV7 1749 aa2.37□□□□□ -2.03
CD44-212ENST00000524922 MAP3K5Q99683 1374 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 ZFYVE9O95405 1425 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 COL22A1Q8NFW1 1626 aaPredicted RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 XIRP1Q702N8 1843 aaKnown RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 PRAMEF33A0A0G2JMD5 474 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 ADM5C9JUS6 153 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 MPPED1O15442 326 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 TEX33O43247 280 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 PRAMEF10O60809 474 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 SUN1O94901 812 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 EDNRBP24530 442 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 PCSK6P29122 969 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 MXRA7P84157 204 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 MC2RQ01718 297 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 ZNF425Q6IV72 752 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 PEG10Q86TG7 708 aaKnown RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 NOP9Q86U38 636 aaKnown RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 FITM2Q8N6M3 262 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 CCHCR1Q8TD31 782 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 LRRC59Q96AG4 307 aaKnown RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 MRGPRX4Q96LA9 322 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 KLHL32Q96NJ5 620 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 PNKPQ96T60 521 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 UHRF1Q96T88 793 aaPredicted RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 REXO4Q9GZR2 422 aaKnown RBP2.36□□□□□ -2.03
CD44-212ENST00000524922 KIAA1586Q9HCI6 787 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 TMEM140Q9NV12 185 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 DNAJC28Q9NX36 388 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 IPPQ9Y573 584 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 GPR45Q9Y5Y3 372 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 MYOM2P54296 1465 aa2.36□□□□□ -2.03
CD44-212ENST00000524922 SETD1AO15047 1707 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms