RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
HDAC2-217ENST00000524334 SNX9Q9Y5X1 595 aa13.79□□□□□ -0.2
HDAC2-217ENST00000524334 PTPRJQ12913 1337 aa13.79□□□□□ -0.2
HDAC2-217ENST00000524334 PRR33A8MZF0 331 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 IKBKBO14920 756 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 N4BP1O75113 896 aaKnown RBP13.78□□□□□ -0.2
HDAC2-217ENST00000524334 PHACTR2O75167 634 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 MICAL2O94851 1124 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 OR4Q2P0C623 313 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 ATICP31939 592 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 EPHB3P54753 998 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 MYL7Q01449 175 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 TSPY1Q01534 308 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 DUSP4Q13115 394 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 TRPC3Q13507 836 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 NFE2Q16621 373 aaPredicted RBP13.78□□□□□ -0.2
HDAC2-217ENST00000524334 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
HDAC2-217ENST00000524334 CEP135Q66GS9 1140 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 GET4Q7L5D6 327 aaPredicted RBP13.78□□□□□ -0.2
HDAC2-217ENST00000524334 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 LEMD2Q8NC56 503 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 PGLYRP2Q96PD5 576 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 MYADMQ96S97 322 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 ACBD6Q9BR61 282 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 KCNK12Q9HB15 430 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 L1RE1Q9UN81 338 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
HDAC2-217ENST00000524334 ASB3Q9Y575 518 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 MYH11P35749 1972 aa13.78□□□□□ -0.2
HDAC2-217ENST00000524334 MTMR11A4FU01 709 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 STAU1O95793 577 aaKnown RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 CST3P01034 146 aaPredicted RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 RHOP08100 348 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 NR2F2P24468 414 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 PCSK1P29120 753 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 NTHL1P78549 312 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 ENPEPQ07075 957 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 SIGLEC14Q08ET2 396 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 TWF1Q12792 350 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 ADAM9Q13443 819 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 TDGQ13569 410 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 EDRF1Q3B7T1 1238 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 SLC39A12Q504Y0 691 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 LIMS2Q7Z4I7 341 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 ATAD1Q8NBU5 361 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 OR10T2Q8NGX3 314 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 SPPL2BQ8TCT7 592 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 MMS19Q96T76 1030 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 RTP3Q9BQQ7 232 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 CORO1BQ9BR76 489 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 LRFN3Q9BTN0 628 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 GZF1Q9H116 711 aaPredicted RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 BRWD1Q9NSI6 2320 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 GDE1Q9NZC3 331 aa13.77□□□□□ -0.21
HDAC2-217ENST00000524334 TCF20Q9UGU0 1960 aaKnown RBP13.77□□□□□ -0.21
HDAC2-217ENST00000524334 GABRDO14764 452 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
HDAC2-217ENST00000524334 ASGR2P07307 311 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 KRT13P13646 458 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 PPP1R2P41236 205 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 PRCPP42785 496 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 CASP4P49662 377 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 UBE2HP62256 183 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 INTS8Q75QN2 995 aaKnown RBP13.76□□□□□ -0.21
HDAC2-217ENST00000524334 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
HDAC2-217ENST00000524334 BMP8AQ7Z5Y6 402 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 ADGRF2Q8IZF7 708 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 FGF13Q92913 245 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 FAM84AQ96KN4 292 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 CEP72Q9P209 647 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 SLC27A5Q9Y2P5 690 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 PCDHB5Q9Y5E4 795 aa13.76□□□□□ -0.21
HDAC2-217ENST00000524334 FAM86C2PA6NEL3 165 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
HDAC2-217ENST00000524334 ANHXE9PGG2 379 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 M0R296 226 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 CETN3O15182 167 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 AKAP3O75969 853 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 VNN2O95498 520 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 FGF19O95750 216 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 C4BPAP04003 597 aaKnown RBP13.75□□□□□ -0.21
HDAC2-217ENST00000524334 VAMP7P51809 220 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 EPHA5P54756 1037 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 TNNC1P63316 161 aa13.75□□□□□ -0.21
HDAC2-217ENST00000524334 BIRC3Q13489 604 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms