RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 HCRTO43612 131 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
CLN8-207ENST00000524258 LRRN2O75325 713 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 C8AP07357 584 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 KRT19P08727 400 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 PPP1R2P41236 205 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 MTHFRP42898 656 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 FKBP3Q00688 224 aaKnown RBP12.85□□□□□ -0.35
CLN8-207ENST00000524258 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
CLN8-207ENST00000524258 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLN8-207ENST00000524258 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 DSEQ9UL01 958 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 SNX9Q9Y5X1 595 aa12.85□□□□□ -0.35
CLN8-207ENST00000524258 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
CLN8-207ENST00000524258 PSMA7O14818 248 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
CLN8-207ENST00000524258 HNRNPA1P09651 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLN8-207ENST00000524258 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 LMO2P25791 158 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 ATICP31939 592 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 ARPP19P56211 112 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 NCOA4Q13772 614 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 CCDC142Q17RM4 750 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 ATAT1Q5SQI0 421 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 USP37Q86T82 979 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 TTC9BQ8N6N2 239 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 SLC7A14Q8TBB6 771 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 NECTIN4Q96NY8 510 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 WDR6Q9NNW5 1121 aaKnown RBP12.84□□□□□ -0.35
CLN8-207ENST00000524258 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 FAM50BQ9Y247 325 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 NOTCH4Q99466 2003 aa12.84□□□□□ -0.35
CLN8-207ENST00000524258 HUS1O60921 280 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 TACC1O75410 805 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 ASS1P00966 412 aaKnown RBP12.83□□□□□ -0.36
CLN8-207ENST00000524258 HLA-DRAP01903 254 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 WARSP23381 471 aaKnown RBP12.83□□□□□ -0.36
CLN8-207ENST00000524258 GTF2H1P32780 548 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 GCLMP48507 274 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 STX17P56962 302 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 CES5AQ6NT32 575 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 FAM171BQ6P995 826 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 ATAD1Q8NBU5 361 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 TAS1R2Q8TE23 839 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 SMG7Q92540 1137 aaKnown RBP12.83□□□□□ -0.36
CLN8-207ENST00000524258 SEMA4DQ92854 862 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 SLC35C1Q96A29 364 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 RIPOR3Q96MK2 946 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 CEP63Q96MT8 703 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 TSG101Q99816 390 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 ACBD6Q9BR61 282 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 MRPL45Q9BRJ2 306 aaKnown RBP12.83□□□□□ -0.36
CLN8-207ENST00000524258 NUP62CLQ9H1M0 184 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 DNAJC25Q9H1X3 360 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 APOBEC3GQ9HC16 384 aaKnown RBP12.83□□□□□ -0.36
CLN8-207ENST00000524258 CEP72Q9P209 647 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
CLN8-207ENST00000524258 POLIQ9UNA4 740 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 CTNND2Q9UQB3 1225 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 COQ4Q9Y3A0 265 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 C2orf16Q68DN1 1984 aa12.83□□□□□ -0.36
CLN8-207ENST00000524258 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
CLN8-207ENST00000524258 CCL16O15467 120 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CPB1P15086 417 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 MARSP56192 900 aaKnown RBP12.82□□□□□ -0.36
CLN8-207ENST00000524258 NTHL1P78549 312 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 DUSP4Q13115 394 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 PAK1Q13153 545 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 STIM1Q13586 685 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 WDR72Q3MJ13 1102 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CBWD6Q4V339 395 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CBWD3Q5JTY5 395 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CBWD5Q5RIA9 395 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 SPOPLQ6IQ16 392 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 CCDC149Q6ZUS6 474 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 FRMD5Q7Z6J6 570 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 METTL23Q86XA0 190 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 GJD3Q8N144 294 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
CLN8-207ENST00000524258 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
CLN8-207ENST00000524258 PGLYRP2Q96PD5 576 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms