RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	RNF40	O75150	1001 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	RPA1	P27694	616 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	GBP1	P32455	592 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	PRPH	P41219	470 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	SOX4	Q06945	474 aa	Predicted RBP	11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	SCAP	Q12770	1279 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	BECN1	Q14457	450 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	PDIA5	Q14554	519 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	FAM187B	Q17R55	369 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	CTXN3	Q4LDR2	81 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	PMS2CL	Q68D20	193 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	RNF19B	Q6ZMZ0	732 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	TMC8	Q8IU68	726 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	CHFR	Q96EP1	664 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	USP28	Q96RU2	1077 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	POLD4	Q9HCU8	107 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	GPRC5C	Q9NQ84	441 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	OBP2A	Q9NY56	170 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	KIF3A	Q9Y496	699 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	CELSR3	Q9NYQ7	3312 aa		11.78	□□□□□ -0.52
SORBS3-222	ENST00000524057	SMIM28	A0A1B0GU29	152 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	OTOL1	A6NHN0	477 aa	Predicted RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	LRRIQ4	A6NIV6	560 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	EIF4E1B	A6NMX2	242 aa	Known RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057		H0Y626	953 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	SYN3	O14994	580 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	STX6	O43752	255 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	TRIM16	O95361	564 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	EGF	P01133	1207 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	GALK1	P51570	392 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	PLCB2	Q00722	1185 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	PRPF4B	Q13523	1007 aa	Known RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	GNL2	Q13823	731 aa	Known RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	KARS	Q15046	597 aa	Known RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	SF3A1	Q15459	793 aa	Known RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	EEF1DP3	Q658K8	133 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	GAREM2	Q75VX8	874 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	PIP4P1	Q86T03	277 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	BPIFB1	Q8TDL5	484 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	BSND	Q8WZ55	320 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	IPO9	Q96P70	1041 aa	Known RBP	11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	TUFT1	Q9NNX1	390 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	GKN1	Q9NS71	199 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	ANKEF1	Q9NU02	776 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	PCNX2	A6NKB5	2137 aa		11.77	□□□□□ -0.53
SORBS3-222	ENST00000524057	BPTF	Q12830	3046 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057		E9PMD0	336 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	LAD1	O00515	517 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	VNN2	O95498	520 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	APBB3	O95704	486 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	EDN1	P05305	212 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	XRCC6	P12956	609 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	FAM193A	P78312	1265 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	SEMA3B	Q13214	749 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	HYI	Q5T013	277 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	MAEA	Q7L5Y9	396 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	SYT13	Q7L8C5	426 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	BRAP	Q7Z569	592 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	ABCA7	Q8IZY2	2146 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	DAW1	Q8N136	415 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	GLIS3	Q8NEA6	775 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	PIGK	Q92643	395 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	FAM83C	Q9BQN1	747 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	ADPGK	Q9BRR6	497 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	DNAJC25	Q9H1X3	360 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	ATXN3L	Q9H3M9	355 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	CACNA2D2	Q9NY47	1150 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	LRWD1	Q9UFC0	647 aa		11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	FBXO2	Q9UK22	296 aa	Predicted RBP	11.76	□□□□□ -0.53
SORBS3-222	ENST00000524057	ATG2B	Q96BY7	2078 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	ASCC3	Q8N3C0	2202 aa	Known RBP	11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	VWA3A	A6NCI4	1184 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	ACKR2	O00590	384 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	PODXL	O00592	558 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	PRAMEF12	O95522	483 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	PDC	P20941	246 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	BCKDHB	P21953	392 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	WEE1	P30291	646 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	RDX	P35241	583 aa	Known RBP	11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	MAPK8	P45983	427 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	DGKE	P52429	567 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	LMAN2	Q12907	356 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	MAPK7	Q13164	816 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	RUNX3	Q13761	415 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	DMC1	Q14565	340 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	TMEM132A	Q24JP5	1023 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	USP39	Q53GS9	565 aa	Known RBP	11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	GPR158	Q5T848	1215 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	ALKAL1	Q6UXT8	129 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	DTHD1	Q6ZMT9	781 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	CYP2U1	Q7Z449	544 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	HSCB	Q8IWL3	235 aa		11.75	□□□□□ -0.53
SORBS3-222	ENST00000524057	BEST2	Q8NFU1	509 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms