RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CTDNEP1O95476 244 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 ARSAP15289 507 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 HOXA6P31267 233 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
SDCBP-211ENST00000523441 MCM2P49736 904 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 LRSAM1Q6UWE0 723 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 ARMCX6Q7L4S7 300 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 DIS3L2Q8IYB7 885 aaKnown RBP12.68□□□□□ -0.38
SDCBP-211ENST00000523441 STKLD1Q8NE28 680 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 ERMNQ8TAM6 284 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 TNFRSF25Q93038 417 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 CHFRQ96EP1 664 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 GCNAQ96QF7 691 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 MTMR9Q96QG7 549 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 FBRSL1Q9HCM7 1045 aaKnown RBP12.68□□□□□ -0.38
SDCBP-211ENST00000523441 TMEM9BQ9NQ34 198 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 TCHHQ07283 1943 aa12.68□□□□□ -0.38
SDCBP-211ENST00000523441 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 PHLPP2Q6ZVD8 1323 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 DENND4CQ5VZ89 1909 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 MTMR11A4FU01 709 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
SDCBP-211ENST00000523441 SFI1A8K8P3 1242 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 KHNYNO15037 678 aaKnown RBP12.67□□□□□ -0.38
SDCBP-211ENST00000523441 REC8O95072 547 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 SEC24BO95487 1268 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 KCNE1P15382 129 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
SDCBP-211ENST00000523441 MAPK8P45983 427 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 NPTX2P47972 431 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 DHPSP49366 369 aaPredicted RBP12.67□□□□□ -0.38
SDCBP-211ENST00000523441 RAD51AP2Q09MP3 1159 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 RUNX3Q13761 415 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 ZNF174Q15697 407 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 ECM1Q16610 540 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 MGAT5BQ3V5L5 792 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 XKR4Q5GH76 650 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 C19orf48Q6RUI8 117 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 ZC3H10Q96K80 434 aaKnown RBP12.67□□□□□ -0.38
SDCBP-211ENST00000523441 HPS4Q9NQG7 708 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 CNTN3Q9P232 1028 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 TPCN1Q9ULQ1 816 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
SDCBP-211ENST00000523441 OBSL1O75147 1896 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 BCLAF3A2AJT9 711 aaKnown RBP12.66□□□□□ -0.38
SDCBP-211ENST00000523441 SLC16A4O15374 487 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 HIP1RO75146 1068 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 CXCL8P10145 99 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 MCF2P10911 925 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 GALK1P51570 392 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 SEC13P55735 322 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 BFSP1Q12934 665 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 TRIM29Q14134 588 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 PTPAQ15257 358 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 SLC10A6Q3KNW5 377 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 SLC39A12Q504Y0 691 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 TMEM196Q5HYL7 178 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 TAS1R3Q7RTX0 852 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 ITIH5Q86UX2 942 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 MAB21L3Q8N8X9 362 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 WASF1Q92558 559 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 PIGKQ92643 395 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 GATA6Q92908 595 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 PSMG2Q969U7 264 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
SDCBP-211ENST00000523441 SLC46A2Q9BY10 475 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 TASP1Q9H6P5 420 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 KLK13Q9UKR3 277 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 KIAA1024Q9UPX6 916 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 TSC2P49815 1807 aa12.66□□□□□ -0.38
SDCBP-211ENST00000523441 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 PPEF2O14830 753 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 PFKFB2O60825 505 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 AKAP3O75969 853 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 LARGE1O95461 756 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 APBB3O95704 486 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
SDCBP-211ENST00000523441 BCKDHBP21953 392 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 RPA1P27694 616 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 AVPR1AP37288 418 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 IRX4P78413 519 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 GPR17Q13304 367 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
SDCBP-211ENST00000523441 DMC1Q14565 340 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 VEPH1Q14D04 833 aa12.65□□□□□ -0.38
SDCBP-211ENST00000523441 ZRSR1Q15695 479 aaKnown RBP12.65□□□□□ -0.38
SDCBP-211ENST00000523441 CC2D1AQ6P1N0 951 aaPredicted RBP12.65□□□□□ -0.38
SDCBP-211ENST00000523441 CAMKK1Q8N5S9 505 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms