RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 GOLGA8JA6NMD2 632 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 HUS1O60921 280 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 VNN2O95498 520 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ITGB3P05106 788 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 POLR2BP30876 1174 aaKnown RBP11.74□□□□□ -0.53
PVT1-216ENST00000523068 CCR2P41597 374 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 SNRPFP62306 86 aaKnown RBP11.74□□□□□ -0.53
PVT1-216ENST00000523068 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
PVT1-216ENST00000523068 SNW1Q13573 536 aaKnown RBP11.74□□□□□ -0.53
PVT1-216ENST00000523068 MLF2Q15773 248 aaPredicted RBP11.74□□□□□ -0.53
PVT1-216ENST00000523068 SLC39A12Q504Y0 691 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 SLC44A4Q53GD3 710 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 FAM26FQ5R3K3 315 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 RESP18Q5W5W9 173 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 WSCD1Q658N2 575 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 CEP57L1Q8IYX8 460 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 DCP1BQ8IZD4 617 aaKnown RBP11.74□□□□□ -0.53
PVT1-216ENST00000523068 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 CSGALNACT2Q8N6G5 542 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 LRRC52Q8N7C0 313 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ATAD1Q8NBU5 361 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ZSWIM2Q8NEG5 633 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 OR10T2Q8NGX3 314 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 SMARCD2Q92925 531 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 PSMG2Q969U7 264 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 E2F7Q96AV8 911 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 BORCS6Q96GS4 357 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ANKRD36BP1Q96IX9 119 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 CRISPLD1Q9H336 500 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 FAM86C1Q9NVL1 165 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 SLC27A5Q9Y2P5 690 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 TICRRQ7Z2Z1 1910 aa11.74□□□□□ -0.53
PVT1-216ENST00000523068 PVALEFA0A1B0GWK0 134 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 KANSL1LA0AUZ9 987 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 TNNC2P02585 160 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 KRT19P08727 400 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 PSMC3P17980 439 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 RBP5P82980 135 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 TSPY1Q01534 308 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 MYO1EQ12965 1108 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 PKP1Q13835 747 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 ZNF638Q14966 1978 aaKnown RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 VEPH1Q14D04 833 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 ANGPT1Q15389 498 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 NFE2Q16621 373 aaPredicted RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 TANGO2Q6ICL3 276 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 EPM2AIP1Q7L775 607 aaPredicted RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 DNAJB7Q7Z6W7 309 aaPredicted RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 C1orf127Q8N9H9 656 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 PJA1Q8NG27 643 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 PATJQ8NI35 1801 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 FAM200AQ8TCP9 573 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 DNASE1L2Q92874 299 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 HPS3Q969F9 1004 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 GBP4Q96PP9 640 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 TMEM209Q96SK2 561 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 PHOX2BQ99453 314 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 SEPT5Q99719 369 aaPredicted RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 TRMT61BQ9BVS5 477 aaKnown RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 DNAJC25Q9H1X3 360 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 SLITRK6Q9H5Y7 841 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 TRPV4Q9HBA0 871 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 PDE11AQ9HCR9 933 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 HSPBP1Q9NZL4 362 aa11.73□□□□□ -0.53
PVT1-216ENST00000523068 CGNQ9P2M7 1197 aaKnown RBP11.73□□□□□ -0.53
PVT1-216ENST00000523068 OBSL1O75147 1896 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 A0A1W2PRU2 124 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 PROB1E7EW31 1015 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 MOSPD3O75425 235 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 FCARP24071 287 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 NBL1P41271 181 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 MAGEA9P43362 315 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 AFMP43652 599 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 WNT7BP56706 349 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 KRT85P78386 507 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 MYL7Q01449 175 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 EHHADHQ08426 723 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 BFSP1Q12934 665 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 TEAD2Q15562 447 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 TAF12Q16514 161 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 DUOXA2Q1HG44 320 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 HS2ST1Q7LGA3 356 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 GLIS3Q8NEA6 775 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
PVT1-216ENST00000523068 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 IRF7Q92985 503 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 NELL2Q99435 816 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
PVT1-216ENST00000523068 DDX23Q9BUQ8 820 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms