RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TYMPP19971 482 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 SRSF5Q13243 272 aaKnown RBP16.7■□□□□ 0.26
MRPS28-209ENST00000522987 GAS6Q14393 721 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 KYAT1Q16773 422 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
MRPS28-209ENST00000522987 TXNDC11Q6PKC3 985 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 PRR23BQ6ZRT6 265 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 Q6ZS52 159 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 KCTD17Q8N5Z5 321 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
MRPS28-209ENST00000522987 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 TRPV4Q9HBA0 871 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 GTSE1Q9NYZ3 720 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 MAFFQ9ULX9 164 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 CLIC4Q9Y696 253 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 ANAPC1Q9H1A4 1944 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 SPTBN2O15020 2390 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 ARNTLO00327 626 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 PIRO00625 290 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 CYB561D2O14569 222 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 LILRB5O75023 590 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 CHRNB1P11230 501 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 ATF6P18850 670 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 LONP1P36776 959 aaKnown RBP16.69■□□□□ 0.26
MRPS28-209ENST00000522987 WNT7BP56706 349 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 CEBPZQ03701 1054 aaKnown RBP16.69■□□□□ 0.26
MRPS28-209ENST00000522987 TNK2Q07912 1038 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 MYBPC2Q14324 1141 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 PUM1Q14671 1186 aaKnown RBP eCLIP16.69■□□□□ 0.26
MRPS28-209ENST00000522987 WDR44Q5JSH3 913 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 WSCD1Q658N2 575 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 FAM173BQ6P4H8 233 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 NELL1Q92832 810 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 PSMG2Q969U7 264 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 EPC1Q9H2F5 836 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 PARD6AQ9NPB6 346 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 C2orf42Q9NWW7 574 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 DPP3Q9NY33 737 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 ABI2Q9NYB9 513 aaPredicted RBP16.69■□□□□ 0.26
MRPS28-209ENST00000522987 AGO2Q9UKV8 859 aaKnown RBP16.69■□□□□ 0.26
MRPS28-209ENST00000522987 EML5Q05BV3 1969 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 SPAG17Q6Q759 2223 aa16.69■□□□□ 0.26
MRPS28-209ENST00000522987 MYO16Q9Y6X6 1858 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 ANO9A1A5B4 782 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 CHURC1-FNTBB4DL54 471 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 ADRB2P07550 413 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 TDGF1P13385 188 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 FNTBP49356 437 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 GPR15P49685 360 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 GTF2BQ00403 316 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 KCNA1Q09470 495 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 PON2Q15165 354 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 SDHAF4Q5VUM1 108 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 LRRTM3Q86VH5 581 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
MRPS28-209ENST00000522987 TTC16Q8NEE8 873 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 POMGNT1Q8WZA1 660 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 SAAL1Q96ER3 474 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 CLIC6Q96NY7 704 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 OXCT2Q9BYC2 517 aaPredicted RBP16.68■□□□□ 0.26
MRPS28-209ENST00000522987 GPR88Q9GZN0 384 aa16.68■□□□□ 0.26
MRPS28-209ENST00000522987 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
MRPS28-209ENST00000522987 GREB1Q4ZG55 1949 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 SPECC1L-ADORA2AF8WAN1 911 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 CHADO15335 359 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 CXCL12P48061 93 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 TAF6P49848 677 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 SPEM2Q0P670 501 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 TAF12Q16514 161 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 ARHGAP15Q53QZ3 475 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 CRELD2Q6UXH1 353 aaPredicted RBP16.67■□□□□ 0.26
MRPS28-209ENST00000522987 METTL23Q86XA0 190 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 CD302Q8IX05 232 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 PANK2Q9BZ23 570 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 ZCWPW1Q9H0M4 648 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
MRPS28-209ENST00000522987 TRPV5Q9NQA5 729 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 TMLHEQ9NVH6 421 aa16.67■□□□□ 0.26
MRPS28-209ENST00000522987 GOLGA8IPA6NC78 632 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 GOLGA8JA6NMD2 632 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 SLC26A4O43511 780 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 CTHP32929 405 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 DDIT3P35638 169 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 CCR3P51677 355 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 TFAMQ00059 246 aaKnown RBP16.66■□□□□ 0.26
MRPS28-209ENST00000522987 FCHO2Q0JRZ9 810 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 VEPH1Q14D04 833 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 CCDC142Q17RM4 750 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 BRAPQ7Z569 592 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 ITIH5Q86UX2 942 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 SECISBP2LQ93073 1101 aaKnown RBP16.66■□□□□ 0.26
MRPS28-209ENST00000522987 E2F7Q96AV8 911 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 FAM213AQ9BRX8 229 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 FGFBP2Q9BYJ0 223 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 CCSER1Q9C0I3 900 aa16.66■□□□□ 0.26
MRPS28-209ENST00000522987 MRPL44Q9H9J2 332 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms