RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 FAM171A1Q5VUB5 890 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 GJB7Q6PEY0 223 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 ARHGEF19Q8IW93 802 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 EFHBQ8N7U6 833 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 CCDC150Q8NCX0 1101 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 RIN2Q8WYP3 895 aaPredicted RBP12.79□□□□□ -0.36
PVT1-215ENST00000522963 PCMTD1Q96MG8 357 aaPredicted RBP12.79□□□□□ -0.36
PVT1-215ENST00000522963 APOL5Q9BWW9 433 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 BARX2Q9UMQ3 279 aaPredicted RBP12.79□□□□□ -0.36
PVT1-215ENST00000522963 POLIQ9UNA4 740 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 NUB1Q9Y5A7 615 aa12.79□□□□□ -0.36
PVT1-215ENST00000522963 SF3B1O75533 1304 aaKnown RBP eCLIP12.79□□□□□ -0.367e-6■■■■■ 104.3
PVT1-215ENST00000522963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 KPNA7A9QM74 516 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 EPHB6O15197 1021 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 NOL4O94818 638 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 CLSTN1O94985 981 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 SV2CQ496J9 727 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 ZNF667Q5HYK9 610 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 KLHDC7AQ5VTJ3 777 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 ATXN2LQ8WWM7 1075 aaKnown RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 KAT5Q92993 513 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 ASB2Q96Q27 587 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 EMILIN2Q9BXX0 1053 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 GANQ9H2C0 597 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 FAM207AQ9NSI2 230 aaPredicted RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 APEX2Q9UBZ4 518 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 STK39Q9UEW8 545 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
PVT1-215ENST00000522963 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
PVT1-215ENST00000522963 TBX10O75333 385 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 GLP2RO95838 553 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 CNPP09543 421 aaKnown RBP12.77□□□□□ -0.37
PVT1-215ENST00000522963 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.37
PVT1-215ENST00000522963 LTBRP36941 435 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 ASPAP45381 313 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 PRSS55Q6UWB4 352 aaPredicted RBP12.77□□□□□ -0.37
PVT1-215ENST00000522963 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 RRAGAQ7L523 313 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 PPM1KQ8N3J5 372 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 VN1R2Q8NFZ6 395 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 SUSD3Q96L08 255 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 ARID3AQ99856 593 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 TTPALQ9BTX7 342 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 SDCBP2Q9H190 292 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 SSX2IPQ9Y2D8 614 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 FHOD1Q9Y613 1164 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 ITIH6Q6UXX5 1313 aa12.77□□□□□ -0.37
PVT1-215ENST00000522963 M0QZQ0 153 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 CYB561D2O14569 222 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 TRAPPC3O43617 180 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 EFEMP2O95967 443 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 UCHL3P15374 230 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 EPCAMP16422 314 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 PAX3P23760 479 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 CDH8P55286 799 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 TNNC1P63316 161 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 DSG1Q02413 1049 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
PVT1-215ENST00000522963 CUL2Q13617 745 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 CTC1Q2NKJ3 1217 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 RTP2Q5QGT7 225 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 IQCEQ6IPM2 695 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
PVT1-215ENST00000522963 DSTYKQ6XUX3 929 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 TMC6Q7Z403 805 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
PVT1-215ENST00000522963 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.76□□□□□ -0.37
PVT1-215ENST00000522963 FAXDC2Q96IV6 333 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 MMS19Q96T76 1030 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 NAA15Q9BXJ9 866 aaKnown RBP12.76□□□□□ -0.37
PVT1-215ENST00000522963 BCO2Q9BYV7 579 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms