RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	AXIN2	Q9Y2T1	843 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SNX9	Q9Y5X1	595 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	DIP2B	Q9P265	1576 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	LRRIQ1	Q96JM4	1722 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	FOXP2	O15409	715 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SNAP25	P60880	206 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SMARCB1	Q12824	385 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ANKRD20A4	Q4UJ75	823 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ANKRD20A8P	Q5CZ79	823 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ANKRD20A2	Q5SQ80	823 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ANKRD20A1	Q5TYW2	823 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	TMEM270	Q6UE05	265 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	CPA6	Q8N4T0	437 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	GMCL1P1	Q8NEA9	526 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	TTC17	Q96AE7	1141 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	CCDC3	Q9BQI4	270 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SLC40A1	Q9NP59	571 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	USP20	Q9Y2K6	914 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	C1QTNF3-AMACR	E9PGA6	284 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PSMD12	O00232	456 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	KRT16	P08779	473 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ATXN8OS	P0DMR3	200 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PYGB	P11216	843 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PLCG1	P19174	1290 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	GNL1	P36915	607 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CASP2	P42575	452 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	NME3	Q13232	169 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	LBR	Q14739	615 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CMTR1	Q8N1G2	835 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	GFM2	Q969S9	779 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	FAF2	Q96CS3	445 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CGRRF1	Q99675	332 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	NAGPA	Q9UK23	515 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PAIP2B	Q9ULR5	123 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PXDNL	A1KZ92	1463 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	UMODL1	Q5DID0	1318 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PLS3	P13797	630 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CDO1	Q16878	200 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	METTL7B	Q6UX53	244 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	STAMBPL1	Q96FJ0	436 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CDV3	Q9UKY7	258 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SLC39A10	Q9ULF5	831 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	IFRD1	O00458	451 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PLTP	P55058	493 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ARL4C	P56559	192 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	NLRP11	P59045	1033 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ERVK-9	P63128	1117 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ERVK-24	P63145	666 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SRSF11	Q05519	484 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	MTHFD1L	Q6UB35	978 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PARVA	Q9NVD7	372 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	FBXO10	Q9UK96	956 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	NR2E1	Q9Y466	385 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	PITPNM2	Q9BZ72	1349 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	NEXMIF	Q5QGS0	1516 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SPDYE5	A6NIY4	337 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ASS1	P00966	412 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CTSE	P14091	401 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ITGAX	P20702	1163 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CCND1	P24385	295 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	GUCY1A3	Q02108	690 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ACVR2B	Q13705	512 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SPDYE7P	Q495Y7	208 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	TIGD7	Q6NT04	549 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	FAM9C	Q8IZT9	166 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	KCNV2	Q8TDN2	545 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	IL17RA	Q96F46	866 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	MRI	Q9BWK5	157 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SIK2	Q9H0K1	926 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CHCHD3	Q9NX63	227 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	C2CD2L	O14523	706 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SRGAP2	O75044	1071 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	CYP21A2	P08686	494 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	RAD23B	P54727	409 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	KNOP1	Q1ED39	458 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	KLHL35	Q6PF15	583 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ANGPTL8	Q6UXH0	198 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	ZNF579	Q8NAF0	562 aa	Known RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SGSM3	Q96HU1	749 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	WNK4	Q96J92	1243 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	SAMD11	Q96NU1	681 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	GPR20	Q99678	358 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	FGFR1OP2	Q9NVK5	253 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	GPN3	Q9UHW5	284 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	GMEB2	Q9UKD1	530 aa		10.82	□□□□□ -0.68
TCF7-223	ENST00000522653	APOL1	O14791	398 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	GJB1	P08034	283 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	MRPS35	P82673	323 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	DEUP1	Q05D60	604 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	SUZ12	Q15022	739 aa	Known RBP	10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	KRT31	Q15323	416 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	SYCP2L	Q5T4T6	812 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	UNC45A	Q9H3U1	944 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	CYP4F11	Q9HBI6	524 aa		10.81	□□□□□ -0.68
TCF7-223	ENST00000522653	TRAV19	A0A0A6YYK7	116 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms