RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 B4GALT3O60512 393 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 HUS1O60921 280 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 B3GAT3O94766 335 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 KIF4AO95239 1232 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 PAEPP09466 180 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 WEE2P0C1S8 567 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ODC1P11926 461 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 CD58P19256 250 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 CLCN1P35523 988 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 USP8P40818 1118 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 RAP1GAPP47736 663 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 GATMP50440 423 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 PTK2Q05397 1052 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 BMS1Q14692 1282 aaKnown RBP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ASTE1Q2TB18 679 aaPredicted RBP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 RAD9BQ6WBX8 426 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ZNF365Q70YC5 407 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 OTOP2Q7RTS6 562 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 UNC93AQ86WB7 457 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 TMEM86AQ8N2M4 240 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 APPL2Q8NEU8 664 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 HERVK_113Q902F9 699 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 SENP8Q96LD8 212 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 CCDC42Q96M95 316 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 SLC9A7Q96T83 725 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 GDF15Q99988 308 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 LBHD1Q9BQE6 289 aaPredicted RBP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 PAAF1Q9BRP4 392 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 DNAI2Q9GZS0 605 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 DEF6Q9H4E7 631 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 NOCTQ9UK39 431 aaKnown RBP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ZMYND8Q9ULU4 1186 aaPredicted RBP13.94□□□□□ -0.18
CPNE3-205ENST00000522240 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
CPNE3-205ENST00000522240 ATP8B3O60423 1300 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 ZBBXA8MT70 800 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 EIF3CLB5ME19 914 aaKnown RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 M0QZQ0 153 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 CYB561D2O14569 222 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 UPP2O95045 317 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 NDUFA10O95299 355 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 CYP11A1P05108 521 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 PLEKP08567 350 aaPredicted RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 CYP11B1P15538 503 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 SYN1P17600 705 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 WARSP23381 471 aaKnown RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 GNA15P30679 374 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 EIF4A3P38919 411 aaKnown RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 OR1G1P47890 313 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 KIF11P52732 1056 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 CDH8P55286 799 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 DSTYKQ6XUX3 929 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 ZNF571Q7Z3V5 609 aaPredicted RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 ADGRF2Q8IZF7 708 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 WHAMMQ8TF30 809 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 KBTBD7Q8WVZ9 684 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 SUSD3Q96L08 255 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 EIF3CQ99613 913 aaKnown RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CPNE3-205ENST00000522240 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 DSEQ9UL01 958 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 PYCARDQ9ULZ3 195 aa13.93□□□□□ -0.18
CPNE3-205ENST00000522240 TRAPPC3O43617 180 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 AKR1B10O60218 316 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 IPO7O95373 1038 aaKnown RBP13.92□□□□□ -0.18
CPNE3-205ENST00000522240 LCA5LO95447 670 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 TYMPP19971 482 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 SLC11A1P49279 550 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 NDST1P52848 882 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 EPHB4P54760 987 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 CDR2Q01850 454 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 MTF1Q14872 753 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 SLC18A3Q16572 532 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 TIGD5Q53EQ6 642 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 CD300LGQ6UXG3 332 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 NOP9Q86U38 636 aaKnown RBP13.92□□□□□ -0.18
CPNE3-205ENST00000522240 SLC47A2Q86VL8 602 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 GPIHBP1Q8IV16 184 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 PDCL2Q8N4E4 241 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 PHOSPHO2Q8TCD6 241 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 DDX1Q92499 740 aaKnown RBP13.92□□□□□ -0.18
CPNE3-205ENST00000522240 MRPL45Q9BRJ2 306 aaKnown RBP13.92□□□□□ -0.18
CPNE3-205ENST00000522240 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 NT5C1AQ9BXI3 368 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
CPNE3-205ENST00000522240 EPN1Q9Y6I3 576 aaPredicted RBP13.92□□□□□ -0.18
CPNE3-205ENST00000522240 SOX1O00570 391 aaPredicted RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 GABRDO14764 452 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 NRP1O14786 923 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 GJB5O95377 273 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 LHX1P48742 406 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 RAD23BP54727 409 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 KRT83P78385 493 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms