RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 NUP58Q9BVL2 599 aa7.34□□□□□ -1.23
SPIDR-218ENST00000522222 RXFP1Q9HBX9 757 aa7.34□□□□□ -1.23
SPIDR-218ENST00000522222 EXOC1Q9NV70 894 aa7.34□□□□□ -1.23
SPIDR-218ENST00000522222 INTS13Q9NVM9 706 aa7.34□□□□□ -1.23
SPIDR-218ENST00000522222 AGO2Q9UKV8 859 aaKnown RBP7.34□□□□□ -1.23
SPIDR-218ENST00000522222 UBQLN1Q9UMX0 589 aaKnown RBP7.34□□□□□ -1.23
SPIDR-218ENST00000522222 FAM50BQ9Y247 325 aa7.34□□□□□ -1.23
SPIDR-218ENST00000522222 SSX2IPQ9Y2D8 614 aa7.34□□□□□ -1.23
SPIDR-218ENST00000522222 DENND4AQ7Z401 1863 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 PVALEFA0A1B0GWK0 134 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CTAGE9A4FU28 777 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 GOLGA8IPA6NC78 632 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 GOLGA8JA6NMD2 632 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 PSMA7O14818 248 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 PPEF2O14830 753 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 ADAM12O43184 909 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 ZRANB2O95218 330 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 IPO7O95373 1038 aaKnown RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 GLUD1P00367 558 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 WEE2P0C1S8 567 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 PNMA6AP0CW24 399 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 HOXB8P17481 243 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 GARTP22102 1010 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 FGFR3P22607 806 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 LRPAP1P30533 357 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 RPL9P32969 192 aaKnown RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CREMQ03060 361 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 TMEM132DQ14C87 1099 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 ZBTB6Q15916 424 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 BMT2Q1RMZ1 405 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 RARS2Q5T160 578 aaKnown RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 IQCEQ6IPM2 695 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 DCLRE1AQ6PJP8 1040 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CRELD2Q6UXH1 353 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 RSRC2Q7L4I2 434 aaKnown RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CEP57Q86XR8 500 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 ADHFE1Q8IWW8 467 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 NELFCDQ8IXH7 590 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 EFCAB13Q8IY85 973 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 GPR65Q8IYL9 337 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 C12orf76Q8N812 135 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 KIAA0895Q8NCT3 520 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 BEST2Q8NFU1 509 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 SCFD1Q8WVM8 642 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 RUBCNQ92622 972 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 FAM84AQ96KN4 292 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 FAM213AQ9BRX8 229 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CARD6Q9BX69 1037 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 S1PR5Q9H228 398 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 PCIF1Q9H4Z3 704 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 THAP9Q9H5L6 903 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 TMEM206Q9H813 350 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 SFXN1Q9H9B4 322 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 SLC39A2Q9NP94 309 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 MAN1C1Q9NR34 630 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 AGPAT3Q9NRZ7 376 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 RBAKQ9NYW8 714 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 MAGEC2Q9UBF1 373 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 MTRRQ9UBK8 725 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 CDC23Q9UJX2 597 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 DERAQ9Y315 318 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 C2CD2Q9Y426 696 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 NUB1Q9Y5A7 615 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-218ENST00000522222 ADGRG1Q9Y653 693 aa7.33□□□□□ -1.24
SPIDR-218ENST00000522222 PPP1R3GB7ZBB8 358 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 TNFRSF10AO00220 468 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 TGFB1I1O43294 461 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 XPOTO43592 962 aaKnown RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 TRAPPC3O43617 180 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 EXTL3O43909 919 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 IL18RAPO95256 599 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 FGFR1OPO95684 399 aaKnown RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 RPN1P04843 607 aaKnown RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CYP3A5P20815 502 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 AARSP49588 968 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CYP2J2P51589 502 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 KRT83P78385 493 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CBX2Q14781 532 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 MAP9Q49MG5 647 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 COBLL1Q53SF7 1204 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 VARS2Q5ST30 1063 aaKnown RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 FOXR2Q6PJQ5 311 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 APTXQ7Z2E3 356 aaKnown RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CBWD2Q8IUF1 395 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CD302Q8IX05 232 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 LNX1Q8TBB1 728 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 ZNF507Q8TCN5 953 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 DHTKD1Q96HY7 919 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 SUSD3Q96L08 255 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 TSPAN18Q96SJ8 248 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 NAPGQ99747 312 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CLSTN3Q9BQT9 956 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 ADAM7Q9H2U9 754 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 ASB7Q9H672 318 aa7.32□□□□□ -1.24
SPIDR-218ENST00000522222 CD320Q9NPF0 282 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms