RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TBC1D4O60343 1298 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 NDST3O95803 873 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 ANXA1P04083 346 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 CYP1A1P04798 512 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 RAP2AP10114 183 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 PIM1P11309 404 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 CKBP12277 381 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 HSD3B1P14060 373 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 PNLIPRP1P54315 467 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 SLURP1P55000 103 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 NPEPPSP55786 919 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 SPARCL1Q14515 664 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 CYP26C1Q6V0L0 522 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 RALYLQ86SE5 291 aaKnown RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 Q8NA96 180 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 SHCBP1Q8NEM2 672 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 DNERQ8NFT8 737 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 OR1N1Q8NGS0 311 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF566Q969W8 418 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 EID2BQ96D98 161 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 IQCDQ96DY2 449 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 NEIL1Q96FI4 390 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF512Q96ME7 567 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 RMDN3Q96TC7 470 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 NEU1Q99519 415 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 TINAGL1Q9GZM7 467 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 SEC61A2Q9H9S3 476 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 MSL2Q9HCI7 577 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 NECTIN3Q9NQS3 549 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 ITM2CQ9NQX7 267 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 CNNM1Q9NRU3 951 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 TM7SF3Q9NS93 570 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 DKK4Q9UBT3 224 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 SCAF8Q9UPN6 1271 aaKnown RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 TBC1D30Q9Y2I9 924 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 NR2E1Q9Y466 385 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 PLEKHM1Q9Y4G2 1056 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 A0A1B0GVC2 190 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 hCG_1642624A0A1W2PR95 340 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 ACKR2O00590 384 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 DHHO43323 396 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 SH3BP5O60239 455 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 B4GALT4O60513 344 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 HAUS5O94927 633 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 AGFG2O95081 481 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 ITGA5P08648 1049 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 DHRS4L1P0CG22 281 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 KLRC1P26715 233 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 CARSP49589 748 aaKnown RBP4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 ITGA8P53708 1063 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 EPHB4P54760 987 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 PTH1RQ03431 593 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 FSTL1Q12841 308 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 PPFIA1Q13136 1202 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 FHL3Q13643 280 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 BLMHQ13867 455 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 SIM2Q14190 667 aaPredicted RBP4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 POSTNQ15063 836 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 RAB30Q15771 203 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 PDCD2Q16342 344 aaPredicted RBP4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZIK1Q3SY52 487 aaPredicted RBP4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 METTL24Q5JXM2 366 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 KRT40Q6A162 431 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 FAM111BQ6SJ93 734 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 USP49Q70CQ1 688 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 BEND5Q7L4P6 421 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 GAS2L3Q86XJ1 694 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 SLC15A4Q8N697 577 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 FANCBQ8NB91 859 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 NLGN4YQ8NFZ3 816 aaPredicted RBP4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 DPYSL5Q9BPU6 564 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 TCF25Q9BQ70 676 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 PACSIN1Q9BY11 444 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 MYLK2Q9H1R3 596 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 SERHLQ9NQF3 203 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 RGL1Q9NZL6 768 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 XPR1Q9UBH6 696 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 GTF2A1LQ9UNN4 478 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 LZTS1Q9Y250 596 aa4.14□□□□□ -1.75
HMGN1P28-201ENST00000521340 AQP12BA6NM10 295 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 DRGXA6NNA5 263 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF785A8K8V0 405 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 IPO5O00410 1097 aaKnown RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 KIF20AO95235 890 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 POMCP01189 267 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 GRPP07492 148 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 CD53P19397 219 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 IL1R2P27930 398 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 ZNF135P52742 658 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 PSMC1P62191 440 aaKnown RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 POU6F2P78424 691 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 STARD3Q14849 445 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 NOMO2Q5JPE7 1267 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 RRAGBQ5VZM2 374 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 RAP1GAP2Q684P5 730 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 LMBRD2Q68DH5 695 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 GGT6Q6P531 493 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 BORAQ6PGQ7 559 aa4.13□□□□□ -1.75
HMGN1P28-201ENST00000521340 HTR3DQ70Z44 454 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms