RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ZSWIM2Q8NEG5 633 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 FAM200AQ8TCP9 573 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 CACTINQ8WUQ7 758 aaKnown RBP17.08■□□□□ 0.32
CLN8-205ENST00000520991 DNASE1L2Q92874 299 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 DHX58Q96C10 678 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
CLN8-205ENST00000520991 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 GPR88Q9GZN0 384 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 ZCWPW1Q9H0M4 648 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 CUEDC2Q9H467 287 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 PCIF1Q9H4Z3 704 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 LTB4R2Q9NPC1 389 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 HSFX1Q9UBD0 423 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 CFAP54Q96N23 3096 aa17.08■□□□□ 0.32
CLN8-205ENST00000520991 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 SCN1AP35498 2009 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 GOLGA8IPA6NC78 632 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 GOLGA8JA6NMD2 632 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 EXTL3O43909 919 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 PSMC3P17980 439 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 POLR2BP30876 1174 aaKnown RBP17.07■□□□□ 0.32
CLN8-205ENST00000520991 VIPR2P41587 438 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
CLN8-205ENST00000520991 CDR1P51861 262 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 WNT7BP56706 349 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 AMPD3Q01432 767 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 VEPH1Q14D04 833 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 FOXD4L6Q3SYB3 417 aaPredicted RBP17.07■□□□□ 0.32
CLN8-205ENST00000520991 MGAT5BQ3V5L5 792 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 FOXD4L3Q6VB84 417 aaPredicted RBP17.07■□□□□ 0.32
CLN8-205ENST00000520991 DNAJB7Q7Z6W7 309 aaPredicted RBP17.07■□□□□ 0.32
CLN8-205ENST00000520991 IRF7Q92985 503 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 OSBPL6Q9BZF3 934 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 AGAP1Q9UPQ3 857 aa17.07■□□□□ 0.32
CLN8-205ENST00000520991 MTF2Q9Y483 593 aaPredicted RBP17.07■□□□□ 0.32
CLN8-205ENST00000520991 TCHHQ07283 1943 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 CUTAO60888 179 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 FGF19O95750 216 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 ITGB3P05106 788 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
CLN8-205ENST00000520991 GDI1P31150 447 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 ASIC1P78348 528 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 SMARCB1Q12824 385 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 E2F4Q16254 413 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 TAF12Q16514 161 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 VITQ6UXI7 678 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 IQUBQ8NA54 791 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 DEPDC1BQ8WUY9 529 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 PSMG2Q969U7 264 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 NELL2Q99435 816 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 LRRC3Q9BY71 257 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 ATXN3LQ9H3M9 355 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 TRPV4Q9HBA0 871 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
CLN8-205ENST00000520991 SPATA6Q9NWH7 488 aaPredicted RBP17.06■□□□□ 0.32
CLN8-205ENST00000520991 MRPS17Q9Y2R5 130 aaKnown RBP17.06■□□□□ 0.32
CLN8-205ENST00000520991 ZNF263O14978 683 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 KIAA0391O15091 583 aaKnown RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 NCAM2O15394 837 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 KRT19P08727 400 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 TMEM191BP0C7N4 346 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 GABRR2P28476 465 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 MAGEA9P43362 315 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 TSPY1Q01534 308 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 BFSP1Q12934 665 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 ARHGAP15Q53QZ3 475 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 ZC3H14Q6PJT7 736 aaKnown RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 YAF2Q8IY57 180 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 DCP1BQ8IZD4 617 aaKnown RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 GPD1LQ8N335 351 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 C1orf127Q8N9H9 656 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 SPPL2BQ8TCT7 592 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 C2orf15Q8WU43 125 aaKnown RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 BORCS6Q96GS4 357 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 GCNAQ96QF7 691 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 LPIN3Q9BQK8 851 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 ZNF334Q9HCZ1 680 aaPredicted RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 ABI2Q9NYB9 513 aaPredicted RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
CLN8-205ENST00000520991 R3HCC1Q9Y3T6 440 aaKnown RBP17.05■□□□□ 0.32
CLN8-205ENST00000520991 HEPACAM2A8MVW5 462 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 LAMTOR5O43504 91 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 HUS1O60921 280 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 F13A1P00488 732 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 SP9P0CG40 484 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
CLN8-205ENST00000520991 STXBP5Q5T5C0 1151 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 GAREM2Q75VX8 874 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 MFSD6LQ8IWD5 586 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 CSGALNACT2Q8N6G5 542 aa17.04■□□□□ 0.32
CLN8-205ENST00000520991 LRRC52Q8N7C0 313 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms