RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 ITGA11Q9UKX5 1188 aa11.59□□□□□ -0.55
PVT1-209ENST00000520913 SIT1Q9Y3P8 196 aa11.59□□□□□ -0.55
PVT1-209ENST00000520913 ASB3Q9Y575 518 aa11.59□□□□□ -0.55
PVT1-209ENST00000520913 KANSL1LA0AUZ9 987 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 GOLGA8IPA6NC78 632 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 GOLGA8JA6NMD2 632 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 KPNA7A9QM74 516 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 GFRA3O60609 400 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 PRPF6O94906 941 aaKnown RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 FGF19O95750 216 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 DCNP07585 359 aaKnown RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 TMEM191BP0C7N4 346 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 POLR2BP30876 1174 aaKnown RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 ME1P48163 572 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 WNT7BP56706 349 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 SMARCB1Q12824 385 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 SNW1Q13573 536 aaKnown RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 VEPH1Q14D04 833 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 FOXD4L6Q3SYB3 417 aaPredicted RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 FAM26FQ5R3K3 315 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 CNNM4Q6P4Q7 775 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 FOXD4L3Q6VB84 417 aaPredicted RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 ITIH5Q86UX2 942 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 TTC9BQ8N6N2 239 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 LRRC52Q8N7C0 313 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 ZSWIM2Q8NEG5 633 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 SPPL2BQ8TCT7 592 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 SMARCD2Q92925 531 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 PSMG2Q969U7 264 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
PVT1-209ENST00000520913 FOXQ1Q9C009 403 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 GPR88Q9GZN0 384 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 PCIF1Q9H4Z3 704 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 FAM13BQ9NYF5 915 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 KIAA1549LQ6ZVL6 1849 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 MYH10P35580 1976 aa11.58□□□□□ -0.56
PVT1-209ENST00000520913 MYO16Q9Y6X6 1858 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 ZFHX2Q9C0A1 2572 aaPredicted RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 A0A1W2PRU2 124 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 NRG2O14511 850 aaPredicted RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 MOSPD3O75425 235 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 MAGEA9P43362 315 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 TUFMP49411 452 aaKnown RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 TSPY1Q01534 308 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 UBXN2BQ14CS0 331 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 SURF1Q15526 300 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 TEAD2Q15562 447 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 MGAT5BQ3V5L5 792 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 SLC44A4Q53GD3 710 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 WSCD1Q658N2 575 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 POTEHQ6S545 545 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 VITQ6UXI7 678 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 TPRG1Q6ZUI0 275 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 DCP1BQ8IZD4 617 aaKnown RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 ATAD1Q8NBU5 361 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 GLIS3Q8NEA6 775 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 ZSCAN18Q8TBC5 510 aaPredicted RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 HPS3Q969F9 1004 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 E2F7Q96AV8 911 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 ANKRD36BP1Q96IX9 119 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 GCNAQ96QF7 691 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 SEPT5Q99719 369 aaPredicted RBP11.57□□□□□ -0.56
PVT1-209ENST00000520913 C7orf25Q9BPX7 421 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 LRRC3Q9BY71 257 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 PLA2G2FQ9BZM2 168 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 MTMR12Q9C0I1 747 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 BRD9Q9H8M2 597 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 TRPV4Q9HBA0 871 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 LTB4R2Q9NPC1 389 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 DLGAP2Q9P1A6 1054 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 CFAP45Q9UL16 551 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 AGAP1Q9UPQ3 857 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 SLC27A5Q9Y2P5 690 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 ZNF292O60281 2723 aa11.57□□□□□ -0.56
PVT1-209ENST00000520913 DMXL1Q9Y485 3027 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 PRR23AA6NEV1 266 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 HUS1O60921 280 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 SOAT2O75908 522 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 TNNC2P02585 160 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 KRT19P08727 400 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 GJA1P17302 382 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 PSMC3P17980 439 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 ATF6P18850 670 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 MYL7Q01449 175 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 BFSP1Q12934 665 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 PKP1Q13835 747 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 GRM2Q14416 872 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 ARHGAP15Q53QZ3 475 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
PVT1-209ENST00000520913 EPM2AIP1Q7L775 607 aaPredicted RBP11.56□□□□□ -0.56
PVT1-209ENST00000520913 FRMD5Q7Z6J6 570 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms