RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 A8MXQ7 604 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 ACKR2O00590 384 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 GAS2O43903 313 aaKnown RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 KRT7P08729 469 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 PDGFRAP16234 1089 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 ADORA2AP29274 412 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 FNTAP49354 379 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 B3GNT9Q6UX72 402 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 PNMA8AQ86V59 439 aaPredicted RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 ZBED8Q8IZ13 594 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 PYROXD1Q8WU10 500 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 MAFBQ9Y5Q3 323 aaPredicted RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 PDHXO00330 501 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 CST8O60676 142 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 CYP1A2P05177 515 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 BRAFP15056 766 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 RBP5P82980 135 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 PPP2R5DQ14738 602 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 NUGGCQ68CJ6 796 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 C1orf228Q6PIY5 440 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 IQCKQ8N0W5 287 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.73□□□□□ -0.69
MCF2-209ENST00000520602 PAF1Q8N7H5 531 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 CCDC197Q8NCU1 140 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 LMO3Q8TAP4 145 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 ZNF516Q92618 1163 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 P3H4Q92791 437 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 EPN3Q9H201 632 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 ASNSD1Q9NWL6 643 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 FAM53CQ9NYF3 392 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 SEPT10Q9P0V9 454 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 PIN4Q9Y237 131 aaKnown RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 RASA4BC9J798 803 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 F8VP50 259 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 RASA4O43374 803 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 CYP2B6P20813 491 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 RPL7AP62424 266 aaKnown RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 PDIA2Q13087 525 aaKnown RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 PIGHQ14442 188 aaPredicted RBP10.73□□□□□ -0.69
MCF2-209ENST00000520602 CENPUQ71F23 418 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 SRLQ86TD4 932 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 CEP57Q86XR8 500 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 NME8Q8N427 588 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 KLK14Q9P0G3 267 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 TTLL3Q9Y4R7 772 aa10.73□□□□□ -0.69
MCF2-209ENST00000520602 MYH11P35749 1972 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 WDR91A4D1P6 747 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 F5H423 210 aaPredicted RBP10.72□□□□□ -0.69
MCF2-209ENST00000520602 MAP3K6O95382 1288 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 NPTXRO95502 500 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 CETPP11597 493 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 CHN1P15882 459 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 PHBP35232 272 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 SETD4Q9NVD3 440 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 IL18RAPO95256 599 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 SDC4P31431 198 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 PRUNE1Q86TP1 453 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 ZNF354CQ86Y25 554 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 PDIK1LQ8N165 341 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 RASGEF1CQ8N431 466 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 CCHCR1Q8TD31 782 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 ZNF473Q8WTR7 871 aaKnown RBP10.72□□□□□ -0.69
MCF2-209ENST00000520602 SMC6Q96SB8 1091 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 TXNDC16Q9P2K2 825 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 LACTBL1A8MY62 500 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 C4BPAP04003 597 aaKnown RBP10.72□□□□□ -0.69
MCF2-209ENST00000520602 C1orf220Q5T0J3 134 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 KDM7AQ6ZMT4 941 aa10.72□□□□□ -0.69
MCF2-209ENST00000520602 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
MCF2-209ENST00000520602 ACO2Q99798 780 aaKnown RBP10.72□□□□□ -0.69
MCF2-209ENST00000520602 TAF1LQ8IZX4 1826 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 SMCHD1A6NHR9 2005 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 XPOTO43592 962 aaKnown RBP10.71□□□□□ -0.69
MCF2-209ENST00000520602 CYP2C9P11712 490 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 CA4P22748 312 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 TNFRSF8P28908 595 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 ARL2P36404 184 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 CAV1Q03135 178 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 MAMLD1Q13495 774 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 SETDB1Q15047 1291 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 PTGISQ16647 500 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 FAM47EQ6ZV65 393 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 VSIG1Q86XK7 387 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 CCNYQ8ND76 341 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 GPR20Q99678 358 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 GPR88Q9GZN0 384 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 SPC25Q9HBM1 224 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 APOBEC3GQ9HC16 384 aaKnown RBP10.71□□□□□ -0.69
MCF2-209ENST00000520602 DPP3Q9NY33 737 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 DDX56Q9NY93 547 aaKnown RBP10.71□□□□□ -0.69
MCF2-209ENST00000520602 NEU2Q9Y3R4 380 aa10.71□□□□□ -0.69
MCF2-209ENST00000520602 COL2A1P02458 1487 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms