RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	VDR	P11473	427 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	NCAM1	P13591	858 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	FOSL1	P15407	271 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	EGR1	P18146	543 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	YY1	P25490	414 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ATIC	P31939	592 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	MC3R	P41968	323 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	MAN2A2	P49641	1150 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ACAP1	Q15027	740 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	PRAMEF14	Q5SWL7	426 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	KIAA0408	Q6ZU52	694 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	B4GALNT4	Q76KP1	1039 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ALG3	Q92685	438 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	TRAPPC9	Q96Q05	1148 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ACAD9	Q9H845	621 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	DLL4	Q9NR61	685 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	FAM184B	Q9ULE4	1060 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	DAPP1	Q9UN19	280 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	CNPY2	Q9Y2B0	182 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	RPGRIP1L	Q68CZ1	1315 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	TOR1B	O14657	336 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	DAPK3	O43293	454 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ANXA1	P04083	346 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	GNAI2	P04899	355 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	KLRC1	P26715	233 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	KCNQ1	P51787	676 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	COPA	P53621	1224 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	CHRND	Q07001	517 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ADAM15	Q13444	863 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	RTP5	Q14D33	572 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	STIL	Q15468	1287 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	UBE3B	Q7Z3V4	1068 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	KCTD20	Q7Z5Y7	419 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	CD163	Q86VB7	1156 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	SDR16C5	Q8N3Y7	309 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	DTX3	Q8N9I9	347 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	C3orf49	Q96BT1	292 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	SHISA4	Q96DD7	197 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	RTKN	Q9BST9	563 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	BRD8	Q9H0E9	1235 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	LMAN2L	Q9H0V9	348 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	TBC1D29	Q9UFV1	150 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC23A1	Q9UHI7	598 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	VAV3	Q9UKW4	847 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	TTLL3	Q9Y4R7	772 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580	ZMYM3	Q14202	1370 aa		4.12	□□□□□ -1.75
SREK1-208	ENST00000520580		H0Y3Z8	333 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580		M0QYG6	137 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	IGLV1-40	P01703	118 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	DNTT	P04053	509 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	BTF3	P20290	206 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC6A4	P31645	630 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	AARS	P49588	968 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	CCR9	P51686	369 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SCAP	Q12770	1279 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	TDG	Q13569	410 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ERV3-1	Q14264	604 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC29A2	Q14542	456 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	MAPKAPK3	Q16644	382 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	CRB2	Q5IJ48	1285 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SPRED2	Q7Z698	418 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ZC3H18	Q86VM9	953 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	PLXDC1	Q8IUK5	500 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	YAF2	Q8IY57	180 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	STAM	Q92783	540 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	NKD2	Q969F2	451 aa	Predicted RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	LIN37	Q96GY3	246 aa	Predicted RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	TIGD1	Q96MW7	591 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ZMAT2	Q96NC0	199 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	MRPS18A	Q9NVS2	196 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ZDHHC8	Q9ULC8	765 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	AGAP1	Q9UPQ3	857 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580		A0A087WWL8	130 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580		A0A0G2JNJ9	132 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580		B4DLN1	442 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ANP32C	O43423	234 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	WFS1	O76024	890 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC3A2	P08195	630 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SRGAP2B	P0DMP2	458 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	IDE	P14735	1019 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	NPPB	P16860	134 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	RPS6KB1	P23443	525 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ABCD3	P28288	659 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	MAPK4	P31152	587 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ZNF135	P52742	658 aa	Predicted RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	GALNT2	Q10471	571 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	PDCL	Q13371	301 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	KIF22	Q14807	665 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	RPS6KA2	Q15349	733 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ACAD10	Q6JQN1	1059 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	UNC5B	Q8IZJ1	945 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	TMEM57	Q8N5G2	664 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	RFFL	Q8WZ73	363 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	EID2B	Q96D98	161 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	TSPAN17	Q96FV3	270 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms