RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 SOWAHAQ2M3V2 549 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 RAD9BQ6WBX8 426 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 C16orf59Q7L2K0 433 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF571Q7Z3V5 609 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SLC47A2Q86VL8 602 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 UNC93AQ86WB7 457 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF677Q86XU0 584 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 TXLNBQ8N3L3 684 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 PDCL2Q8N4E4 241 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF689Q96CS4 500 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SUSD3Q96L08 255 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF558Q96NG5 402 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 AGPAT1Q99943 283 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 MRPL45Q9BRJ2 306 aaKnown RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 PDCL3Q9H2J4 239 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 RC3H2Q9HBD1 1191 aaKnown RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ADAM28Q9UKQ2 775 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 FAN1Q9Y2M0 1017 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SLC4A7Q9Y6M7 1214 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SF3B1O75533 1304 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 TSC2P49815 1807 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 EIF3CLB5ME19 914 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 I3L4J1 428 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 M0QZQ0 153 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 CCP110O43303 1012 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 NDUFA10O95299 355 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 GJB5O95377 273 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 GALTP07902 379 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TYMPP19971 482 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 BRD2P25440 801 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 MSNP26038 577 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 ALDH7A1P49419 539 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 RAD23BP54727 409 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 BCAR1P56945 870 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 KRT83P78385 493 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 CDR2Q01850 454 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 MTF1Q14872 753 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 SLC18A3Q16572 532 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TIGD5Q53EQ6 642 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TAF3Q5VWG9 929 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 WSCD1Q658N2 575 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TRIM72Q6ZMU5 477 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TMCO2Q7Z6W1 182 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 NOP9Q86U38 636 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 ZSCAN30Q86W11 494 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 SLC20A1Q8WUM9 679 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 KBTBD7Q8WVZ9 684 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TMEM176AQ96HP8 235 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 TNIP3Q96KP6 325 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 EIF3CQ99613 913 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 ELOVL4Q9GZR5 314 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 SPTLC3Q9NUV7 552 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 HCSTQ9UBK5 93 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 HMGXB4Q9UGU5 601 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 NOCTQ9UK39 431 aaKnown RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 PYCARDQ9ULZ3 195 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 CEP83Q9Y592 693 aa9.54□□□□□ -0.88
CSMD1-208ENST00000520561 EPN1Q9Y6I3 576 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-208ENST00000520561 PTPRSQ13332 1948 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 F8W810 466 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 SYN3O14994 580 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 ZSCAN12O43309 604 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 CYP11A1P05108 521 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 ITGB1P05556 798 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 CCDC175P0C221 793 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 VDRP11473 427 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 PCSK1P29120 753 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 PPM1AP35813 382 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 GNL1P36915 607 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 MAGEA10P43363 369 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 FMO1Q01740 532 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 YWHAHQ04917 246 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 GFPT1Q06210 699 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 ORC1Q13415 861 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 STILQ15468 1287 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 SGO2Q562F6 1265 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 OVOS1Q6IE37 1185 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 PPP1R2P3Q6NXS1 205 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 FUT10Q6P4F1 479 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 KCNT2Q6UVM3 1135 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 CD300LGQ6UXG3 332 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 TOGARAM2Q6ZUX3 1019 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 KIAA1328Q86T90 577 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 GLYCTKQ8IVS8 523 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 HERC6Q8IVU3 1022 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 THEM5Q8N1Q8 247 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 FIBCD1Q8N539 461 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 SLC4A11Q8NBS3 891 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 ACRBPQ8NEB7 543 aa9.53□□□□□ -0.88
CSMD1-208ENST00000520561 LNX1Q8TBB1 728 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-208ENST00000520561 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms