RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 ATOH1Q92858 354 aaPredicted RBP6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 CLDN23Q96B33 292 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 LPIN3Q9BQK8 851 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 TRIM9Q9C026 710 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 MFSD1Q9H3U5 465 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 ZSCAN16Q9H4T2 348 aaPredicted RBP6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 MRPL44Q9H9J2 332 aaKnown RBP6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 LTB4R2Q9NPC1 389 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 HEBP1Q9NRV9 189 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 DPP3Q9NY33 737 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 FBXL21Q9UKT6 434 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 MAFFQ9ULX9 164 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 L1RE1Q9UN81 338 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 CEP192Q8TEP8 1941 aa6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 ZFHX2Q9C0A1 2572 aaPredicted RBP6.65□□□□□ -1.34
IGKV3D-25-201ENST00000519599 NUP205Q92621 2012 aa6.65□□□□□ -1.35
IGKV3D-25-201ENST00000519599 EP300Q09472 2414 aaPredicted RBP6.65□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SPTBN4Q9H254 2564 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PLXND1Q9Y4D7 1925 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 A0A1W2PRU2 124 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 OR6C75A6NL08 312 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PRRG1O14668 218 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 GABRDO14764 452 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SPTLC2O15270 562 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 GCNT3O95395 438 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PRAMEF12O95522 483 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 YEATS4O95619 227 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 F13A1P00488 732 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 LRG1P02750 347 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 KRT18P05783 430 aaKnown RBP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CPB1P15086 417 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 GAP43P17677 238 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 STAT6P42226 847 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 MATR3P43243 847 aaKnown RBP eCLIP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 TAF6P49848 677 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PRKCQQ04759 706 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 FCHO2Q0JRZ9 810 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 GRM2Q14416 872 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 LMBRD2Q68DH5 695 aaPredicted RBP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SLFN12LQ6IEE8 588 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 TXNDC11Q6PKC3 985 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CCDC73Q6ZRK6 1079 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PDZD4Q76G19 769 aaPredicted RBP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 DNAJB7Q7Z6W7 309 aaPredicted RBP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 NT5DC4Q86YG4 428 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CBWD2Q8IUF1 395 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 GPIHBP1Q8IV16 184 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PDCL2Q8N4E4 241 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ZSCAN18Q8TBC5 510 aaPredicted RBP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ZNF507Q8TCN5 953 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SCFD1Q8WVM8 642 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 KBTBD7Q8WVZ9 684 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 POMGNT1Q8WZA1 660 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ZNF516Q92618 1163 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PSMG2Q969U7 264 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 FAM212AQ96EL1 285 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 C7orf25Q9BPX7 421 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PYM1Q9BRP8 204 aaKnown RBP6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 FAM213AQ9BRX8 229 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 TNMDQ9H2S6 317 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PDE11AQ9HCR9 933 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 TMEM30AQ9NV96 361 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PANK4Q9NVE7 773 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 HSFX1Q9UBD0 423 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CCDC39Q9UFE4 941 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 PCDHA7Q9UN72 937 aa6.64□□□□□ -1.35
IGKV3D-25-201ENST00000519599 OTOL1A6NHN0 477 aaPredicted RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 HEPACAM2A8MVW5 462 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 KPNA7A9QM74 516 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CYB561D2O14569 222 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 XPOTO43592 962 aaKnown RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ACTN4O43707 911 aaKnown RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 EXTL3O43909 919 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ZNF292O60281 2723 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CUTAO60888 179 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 F11P03951 625 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ITGB3P05106 788 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SP9P0CG40 484 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ZSCAN22P10073 491 aaPredicted RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 HAPLN1P10915 354 aaPredicted RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CHRNB1P11230 501 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ODC1P11926 461 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 MYL4P12829 197 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 POLR2BP30876 1174 aaKnown RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ELF1P32519 619 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 ABCD1P33897 745 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CYP4F8P98187 520 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 CUL4BQ13620 913 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 STK38Q15208 465 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 BMT2Q1RMZ1 405 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SOWAHAQ2M3V2 549 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 SLC39A12Q504Y0 691 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 FOXD4L5Q5VV16 416 aaPredicted RBP6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 RESP18Q5W5W9 173 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 DSTYKQ6XUX3 929 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 TPRG1Q6ZUI0 275 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 C1orf210Q8IVY1 113 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 MFSD6LQ8IWD5 586 aa6.63□□□□□ -1.35
IGKV3D-25-201ENST00000519599 GRAMD1CQ8IYS0 662 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms