RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 CLDND1Q9NY35 253 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 KLK14Q9P0G3 267 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 SIX4Q9UIU6 781 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 NUB1Q9Y5A7 615 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 NCOR1O75376 2440 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 FOXN3O00409 490 aaPredicted RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 OFD1O75665 1012 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 LCA5LO95447 670 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 STAU1O95793 577 aaKnown RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 KRT5P13647 590 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 CTNNB1P35222 781 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 PDE6CP51160 858 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 GUCY2FP51841 1108 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 YWHAEP62258 255 aaKnown RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 RBP5P82980 135 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 PTK2Q05397 1052 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 DLX2Q07687 328 aaPredicted RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 HYAL1Q12794 435 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 SPA17Q15506 151 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 ZBTB6Q15916 424 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 ASTE1Q2TB18 679 aaPredicted RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 SCARA3Q6AZY7 606 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 ZNF571Q7Z3V5 609 aaPredicted RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 MRPL10Q7Z7H8 261 aaKnown RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 FAM71AQ8IYT1 594 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 CXorf38Q8TB03 319 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 PGBD4Q96DM1 585 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 FAXDC2Q96IV6 333 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 RPS6KC1Q96S38 1066 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 ARID3AQ99856 593 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 ADAM2Q99965 735 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 XYLT2Q9H1B5 865 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 MUTYHQ9UIF7 546 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 AGAP1Q9UPQ3 857 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 FAM50BQ9Y247 325 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 GIT1Q9Y2X7 761 aa11.25□□□□□ -0.61
BRD9-216ENST00000518251 REXO2Q9Y3B8 237 aaKnown RBP11.25□□□□□ -0.61
BRD9-216ENST00000518251 NLRC5Q86WI3 1866 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 A0A0U1RQF3 1178 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 ZNF623O75123 536 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 UPP2O95045 317 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 P4HA1P13674 534 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 CYP3A5P20815 502 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 ACO1P21399 889 aaKnown RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 MLH1P40692 756 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 GFPT1Q06210 699 aaPredicted RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 BMS1Q14692 1282 aaKnown RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 CLUL1Q15846 466 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 SLC18A3Q16572 532 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 FAM43BQ6ZT52 329 aaPredicted RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 EP400NLQ6ZTU2 488 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 KIAA1328Q86T90 577 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 ECHDC2Q86YB7 292 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 REXO1L1PQ8IX06 675 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 TXLNBQ8N3L3 684 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 UBR7Q8N806 425 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 APBB2Q92870 758 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 LPPQ93052 612 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 C18orf25Q96B23 403 aaPredicted RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 ZNF560Q96MR9 790 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.24□□□□□ -0.61
BRD9-216ENST00000518251 FTHL17Q9BXU8 183 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 RSAD1Q9HA92 442 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 LUC7LQ9NQ29 371 aaKnown RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 RGS18Q9NS28 235 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 PCDHB4Q9Y5E5 795 aa11.24□□□□□ -0.61
BRD9-216ENST00000518251 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
BRD9-216ENST00000518251 TRIP11Q15643 1979 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 PTGESO14684 152 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 ZNF263O14978 683 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 GRM6O15303 877 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 CYP26A1O43174 497 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 MBTPS2O43462 519 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
BRD9-216ENST00000518251 IBSPP21815 317 aaPredicted RBP11.23□□□□□ -0.61
BRD9-216ENST00000518251 CLCN1P35523 988 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 ASPAP45381 313 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 VAV2P52735 878 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 TNNC1P63316 161 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 MYO1EQ12965 1108 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
BRD9-216ENST00000518251 ARHGAP29Q52LW3 1261 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 AGMOQ6ZNB7 445 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
BRD9-216ENST00000518251 RNF169Q8NCN4 708 aa11.23□□□□□ -0.61
BRD9-216ENST00000518251 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms